Pairwise Alignments

Query, 479 a.a., uracil DNA glycosylase superfamily protein from Caulobacter crescentus NA1000

Subject, 481 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  399 bits (1026), Expect = e-116
 Identities = 219/471 (46%), Positives = 283/471 (60%), Gaps = 18/471 (3%)

Query: 11  DFAGWRRAARVLRAEGARPESLVWTVERE---LFD---NDEPVTDAATTFV-VPAAFMEM 63
           +F  WR AAR   A   RPE + W +  +   L D      PV  A    V VPA+F+ +
Sbjct: 11  EFGEWRDAARAALAADIRPEMIDWRLRDDGAGLLDFAGEPLPVVAAGDGQVSVPASFVAL 70

Query: 64  AQQVVLNRSLDRFALLYRILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKAFVR 123
           AQ ++ +    RFALLYR+LWRL+R+  L++  +D D+A AR + K+V R  HKM AFVR
Sbjct: 71  AQAIICHSEPGRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRRDCHKMTAFVR 130

Query: 124 FRRVE----DAAKETYAAWFEPAHRVTEATAPFFARRFSNMNWTILTPDVCVAWNGERLW 179
           F+ V        +  + AWFEP H + E TA FF RRF++M+W I TP     W+G+ L 
Sbjct: 131 FKEVPLPQGQGGRRRFIAWFEPDHFIVERTAAFFQRRFTDMDWLIATPKGSARWDGDELQ 190

Query: 180 VSEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLI 239
            S  A      +++  E LWRTYYA+IFNPARL  + M  EMPK+YW+NLPEA LIPGL+
Sbjct: 191 TSREAAVKPDLTDETDE-LWRTYYANIFNPARLKIKAMTAEMPKKYWKNLPEADLIPGLV 249

Query: 240 EAAQDRA---AAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCD 296
             A+ R    AA   + P+P   R+  AA       P + G   TL ++      C RC 
Sbjct: 250 LGAEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDG---TLQSLAREARQCTRCA 306

Query: 297 LWREATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTY 356
           L  +ATQ V G+G   A +M VGEQPGD EDLAG P +GPAGQ+FDR L E+   R++ Y
Sbjct: 307 LHCKATQTVFGEGPEDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGAERKKLY 366

Query: 357 VTNAVKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAFGVMGR 416
           VTNAVKHFK+E  GKRR+H+ P  GEV  CRWWL+ E  LVRP +IV +GATA + + G 
Sbjct: 367 VTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWLNREIALVRPKLIVAMGATALYALTGG 426

Query: 417 PTPVRETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRL 467
              V E RGRPLP+ +G    VT HPSYLLRL D  A+E     F  D+ +
Sbjct: 427 KEKVSEIRGRPLPMEEGRTLFVTVHPSYLLRLADIRAKEAEMARFRMDMEI 477