Pairwise Alignments

Query, 596 a.a., very-long-chain acyl-CoA synthetase from Caulobacter crescentus NA1000

Subject, 561 a.a., acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) from Escherichia coli BL21

 Score =  108 bits (270), Expect = 6e-28
 Identities = 129/571 (22%), Positives = 219/571 (38%), Gaps = 74/571 (12%)

Query: 27  IAPDSPNLICDDLEAAVDKWGPRPAITFEGKTITYADLDAMANRYAHWAK-GLGLTRGQT 85
           I PD    + D  E +V ++  +PA    G+ +T+  L+  +  +A + + GLGL +G  
Sbjct: 17  INPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDR 76

Query: 86  VALFMPNRIEYLAIWYGLTKVGVATALINNQLTGAALAHCLTISQAMHCIVDAETSPCFE 145
           VAL MPN ++Y    +G+ + G+    +N   T   L H L  S A   ++ +  +   E
Sbjct: 77  VALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLE 136

Query: 146 DVKGQLERHMQQWVLGPVHDDQRDLLKA------LKSCSQLRPD---------RETAREG 190
            V   +++   Q V+     DQ    K       +K   +L P          R     G
Sbjct: 137 KV---VDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNG 193

Query: 191 ---------LTASDTALYIYTSGTTGLPKAARITHMRAQLYMRGFAGSTGA---KDTDRI 238
                    L   D A   YT GTTG+ K A +TH      +     + G       + +
Sbjct: 194 YRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELV 253

Query: 239 YITLPLYHATG-GLCALGAALLNGGSVVLRKKFSATHFWPEIVAEQCTMFVYIGELCRYL 297
              LPLYH     +  L    L G ++++           E+     T    +  L   L
Sbjct: 254 VTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNAL 313

Query: 298 ANQPEHELERAHKLRMIFGNGLR-----ADVWDDMLDRFKVGDVLEFYGATEG----NVS 348
            N  E +      L +  G G+      A+ W  +  ++    +LE YG TE     +V+
Sbjct: 314 LNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQY----LLEGYGLTECAPLVSVN 369

Query: 349 FFNFDGKRGAIGR-IPSYLRKKFNIRIVKFDVETETPIRGPDGCCIEAGPEEVGECIGHI 407
            ++ D   G+IG  +PS   K  +      D + E P   P   C++ GP+ +       
Sbjct: 370 PYDIDYHSGSIGLPVPSTEAKLVD------DDDNEVPPGQPGELCVK-GPQVM------- 415

Query: 408 GSDARSNFTGYADKAATEKKVLHDVFEKGDAWFRTGDLMKVDHDGYIYFIDRIGDTFRWK 467
                    GY  +     +++ +       W  TGD+  +D +G++  +DR  D     
Sbjct: 416 --------LGYWQRPDATDEIIKN------GWLHTGDIAVMDEEGFLRIVDRKKDMILVS 461

Query: 468 GENVATSEVAERLAGFEGVLEVNVYGVKVGDLDGKAGMASLVTEGDFDLEAFAKYVDEAL 527
           G NV  +E+ + +    GV EV   GV  G       +  +  +     E+   +    L
Sbjct: 462 GFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQL 521

Query: 528 PSYARPLFVRLQKAIETTGTFKYRKIDLVNE 558
             Y  P  V  +  +  +   K  + +L +E
Sbjct: 522 TGYKVPKLVEFRDELPKSNVGKILRRELRDE 552