Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 830 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  413 bits (1062), Expect = e-119
 Identities = 287/864 (33%), Positives = 429/864 (49%), Gaps = 66/864 (7%)

Query: 14  WFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAE--------RP 65
           WF  RGW P   Q  +    + G   LL A TG GKT A +  +L   A+        +P
Sbjct: 11  WFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFAKANTLTADNKP 70

Query: 66  PRNTPAG--VHTLYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQKVR 123
            +  P    +  L+I+P++ALA D  R L  P+ E+ +P     RTGDT  S +ARQ  R
Sbjct: 71  RKRKPPAEPLSVLWITPMRALAADTARALEAPLAELDIPWSVGLRTGDTSGSERARQSRR 130

Query: 124 PPDILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQFAP 183
            P  L+TTPE L L      A+   S L+ V++DE H +  +KRG  L L L+RL+++ P
Sbjct: 131 LPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALARLRRWNP 190

Query: 184 NMRRVGLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGHL 243
            +   G+SAT+ +    ++ L            G+      +G    DLQ          
Sbjct: 191 QLIVWGISATLGNQQHAQQVL-----------IGD-GGVTVQGKIVKDLQ---------- 228

Query: 244 PRAQGRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTALV 303
                      +D +L +           S  R PWAGH     + +V   ++++ + LV
Sbjct: 229 -----------VDTLLPS-----------SIERFPWAGHMGLRMLPQVVAEVESSASCLV 266

Query: 304 FVNTRFQAEFAFQRLWELNDE--GLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTL 361
           F NTR Q+E  +Q L E   +  GL IALHHGSL+ E R  VE A+  G L+AVVCTS+L
Sbjct: 267 FTNTRAQSEIWYQALLEARPDWAGL-IALHHGSLAREVRDWVERALKEGALKAVVCTSSL 325

Query: 362 DMGIDWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADA 421
           D+G+D+  V+ V+Q+ +PKG +R++QR GR+ H    PSR   VP    E++E  AA DA
Sbjct: 326 DLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRPSRVTLVPTHSLELVEAAAAHDA 385

Query: 422 ILENHLDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVD 481
           +    ++        LDVL QH++  A    F P +L  EVRSA  Y +L+ E ++  + 
Sbjct: 386 VEARMIEPRESPHQPLDVLVQHLVSIALGGGFLPDELLGEVRSAWAYHDLSDEQWQWALA 445

Query: 482 FVSTGGYALRTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKP 541
           FV  GG++L  Y  +RR     DG+    +A+  ++HRM+VG I+S A +N++    +K 
Sbjct: 446 FVRNGGHSLTAYPDYRRAEPDEDGVWRVPDARLARRHRMSVGTIVSEATVNLKY--WKKG 503

Query: 542 VGGRKIGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKF 601
            GG  +G  EEG+  +L PGD F+F G++     +    AYV  A      +P W G + 
Sbjct: 504 GGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTAYVKRATGKKAAVPRWNGGRM 563

Query: 602 PLSTYLAERVRQMMHDEREW---SALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRF 658
           PLS+ LA+ V +           S     ++  L  Q+  S +P    +L ET    + +
Sbjct: 564 PLSSELADAVVEKFDAAARGQFNSPEMRAIKPLLEVQQHWSGLPRRDTLLAETLKSREGW 623

Query: 659 HMVCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMD--DLDLDELF 716
           H+  YPF GR  H  L  LL  RL R          NDY L L S   +D       ELF
Sbjct: 624 HLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVNDYGLELLSASEIDWSQTLQAELF 683

Query: 717 AQDMLGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLRK 776
           ++  L  D+ A L+   +  R F+  A I+GL+   +PGA KS RQ+  S+ L ++V ++
Sbjct: 684 SETDLLPDIIASLNAGELALRRFREIARISGLVFSGYPGAAKSNRQLQASSGLFFEVFKQ 743

Query: 777 HQPDHLMLRCARLDAATGLLDIARLGDMLTRVRGRIRHV-ALDRVSPFAVPMMLEIGRER 835
           +  D+++L  A  +     LD+ RL   L ++  R   + A+ R +P A P+++E  RE 
Sbjct: 744 YDADNMLLTQAEQEVLRQELDLQRLELTLRQINSRTLDLHAIKRATPLAFPLLVERFRES 803

Query: 836 APGDAAGEMILAEAEADLIAEARP 859
              +   + I A    DL   A P
Sbjct: 804 LSSEKLADRI-ARMVRDLEKAAGP 826