Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 836 a.a., ligase-associated DNA damage response DEXH box helicase from Rhizobium sp. OAE497

 Score =  948 bits (2451), Expect = 0.0
 Identities = 482/865 (55%), Positives = 615/865 (71%), Gaps = 54/865 (6%)

Query: 6   ALPPQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAER- 64
           ALP  F  WFA++GW PR HQL +L +A AG   LLIAPTG GKTLAGFLP+L +L  R 
Sbjct: 11  ALPAPFIRWFAEKGWRPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFLPALTDLTRRG 70

Query: 65  --PPRNTPAGVHTLYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQKV 122
             PP +   G+HTLY+SPLKALAVD+ERNL  P+ EMGLP+  E+RTGDT  +++ RQK+
Sbjct: 71  KIPPGSAFTGIHTLYVSPLKALAVDIERNLTKPVEEMGLPVTIENRTGDTPNAKRQRQKL 130

Query: 123 RPPDILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQFA 182
            PPDILLTTPEQ+AL  A   A  +F DLR V++DE H++  SKRG +L+LG++RL++ A
Sbjct: 131 NPPDILLTTPEQVALLLANGEAERFFKDLRYVVLDELHSLVTSKRGHMLSLGIARLRRLA 190

Query: 183 PNMRRVGLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGH 242
           PN++ +GLSATV +P  ++KWL V + E     AG V+ E                    
Sbjct: 191 PNLQTIGLSATVAEPMDLQKWL-VAQEEGREHHAGLVTVE-------------------- 229

Query: 243 LPRAQGRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTAL 302
                              GGA+P + +L +  R+PW+GH+A++A+ +VY  +   +T L
Sbjct: 230 -------------------GGAKPEISILKTEERIPWSGHSAKYAIPDVYKELLDHQTTL 270

Query: 303 VFVNTRFQAEFAFQRLWELNDEGLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLD 362
           +FVNTR QAE  FQ LW +N++ LPIALHHGSL   QRRKVEAAMA  +LRAVV TSTLD
Sbjct: 271 LFVNTRSQAEMLFQELWTINEDNLPIALHHGSLDVSQRRKVEAAMAANKLRAVVATSTLD 330

Query: 363 MGIDWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAI 422
           +GIDWGDVDLVI + APKGASR+ QRIGRANHR+DEPS+AI VPA+RFE++EC+AA DA 
Sbjct: 331 LGIDWGDVDLVIHVGAPKGASRLAQRIGRANHRMDEPSKAILVPANRFEVMECQAALDAN 390

Query: 423 LENHLDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDF 482
                D  P   GALDVLAQH++G AC+ PF    LYDE+ SA PYA L+WE FE +VDF
Sbjct: 391 YIGAQDTPPVGQGALDVLAQHVLGMACAAPFDMLQLYDEITSASPYAALSWETFERIVDF 450

Query: 483 VSTGGYALRTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRI----GGG 538
           V+TGGYALRTY+++ RI +  DGL    N Q  QQ+R+N+G I+   M+N+++     GG
Sbjct: 451 VATGGYALRTYERYARIRRNKDGLWRVSNPQVAQQYRLNLGTIVESPMLNLKMVKRGEGG 510

Query: 539 RKPVGGRKIGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGG 598
           R   GG  +G+ EE +FEQL+PGDTF+F+G+V R+  +   +A  S A + DPK+PS+ G
Sbjct: 511 RIGRGGAVLGKMEEYFFEQLSPGDTFIFSGKVLRFEGIRENEALASQAFSLDPKIPSYAG 570

Query: 599 SKFPLSTYLAERVRQMMHDEREWSALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRF 658
            KFPLSTYLA++VR M+ D   W  LP  V++WLS QK +S +P   E+L+ETFPRG R 
Sbjct: 571 GKFPLSTYLADQVRSMIADPDRWGDLPDQVRDWLSIQKDKSMLPKRDELLIETFPRGSRC 630

Query: 659 HMVCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMDD------LDL 712
           +MV YPF+GRLAH TL MLLTRRL+R G  PLGFVC DY+L +W L  +        L L
Sbjct: 631 YMVAYPFEGRLAHQTLGMLLTRRLERAGAKPLGFVCTDYSLGIWGLEDLGQMIASGRLSL 690

Query: 713 DELFAQDMLGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYD 772
            +LF +DMLGD+LEAWLDESF++KR+F++CA+IAGLIERRHPG EKSGRQVT S DLIYD
Sbjct: 691 ADLFDEDMLGDELEAWLDESFLLKRTFRNCAVIAGLIERRHPGKEKSGRQVTVSADLIYD 750

Query: 773 VLRKHQPDHLMLRCARLDAATGLLDIARLGDMLTRVRGRIRHVALDRVSPFAVPMMLEIG 832
           VLR H+PDH++L+  R DA TGLLDI+RLGDML R++G I H ALD +SP AVP+MLEIG
Sbjct: 751 VLRSHEPDHILLQATRQDAGTGLLDISRLGDMLRRIKGHITHRALDHISPLAVPVMLEIG 810

Query: 833 RERAPGDAAGEMILAEAEADLIAEA 857
           +E  PG+ A + +LAEA  DLIAEA
Sbjct: 811 KEAVPGE-AHDALLAEAADDLIAEA 834