Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 826 a.a., ligase-associated DNA damage response DEXH box helicase from Pseudomonas fluorescens SBW25

 Score =  422 bits (1084), Expect = e-122
 Identities = 294/850 (34%), Positives = 424/850 (49%), Gaps = 68/850 (8%)

Query: 14  WFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELA-ERPP----RN 68
           WFA +GW P   Q  +    + GR  LL A TG GKT A +  +L   A  RPP    R 
Sbjct: 11  WFAAKGWKPFAFQKDVWAAVKDGRSGLLHASTGAGKTYALWFAALNRFALTRPPVTGKRK 70

Query: 69  TPAGVHT-LYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQKVRPPDI 127
            PA   T L+I+P++ALA D  R L  P+  + +P     RTGDT  S +ARQ  R P  
Sbjct: 71  PPAEPLTVLWITPMRALAADTARALEAPLEALQIPWSIGLRTGDTSSSERARQTRRQPTA 130

Query: 128 LLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQFAPNMRR 187
           L+TTPE L L  A   +    + LR V++DE H +  +KRG  L L L+RL+++ P +  
Sbjct: 131 LVTTPESLTLMLARADSEASLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPELMV 190

Query: 188 VGLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGHLPRAQ 247
            G+SAT+ +                 P A EV                   P G     Q
Sbjct: 191 WGISATLGNQ----------------PHALEVLV-----------------PQGGGINVQ 217

Query: 248 GRICEP-DIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTALVFVN 306
           G+  +  ++D +L      PV E      R PWAGH     + +V   + A+++ LVF N
Sbjct: 218 GQTVKRLEVDTLL-----PPVAE------RFPWAGHIGLKMLPQVVAEVDASRSCLVFTN 266

Query: 307 TRFQAEFAFQRLWELN-DEGLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGI 365
           TR Q+E  +Q L +   D    IALHHGSLS E R  VE A+  G+L+AVVCTS+LD+G+
Sbjct: 267 TRAQSEIWYQALLDARPDWAGVIALHHGSLSRETRDWVERALKDGQLKAVVCTSSLDLGV 326

Query: 366 DWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILEN 425
           D+  V+ V+Q+ + KG +R++QR GR+ H    PSR   VP    E++E  AA DAI + 
Sbjct: 327 DFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVPTHSLELVEAAAAQDAIAQR 386

Query: 426 HLDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDFVST 485
            ++        LDVL QH++  A    F P  L  EVR A  Y ELT  D+   + FV  
Sbjct: 387 RIEARESPHKPLDVLVQHLVSMALGGGFTPDALLTEVRGAWAYRELTDADWAWALGFVRH 446

Query: 486 GGYALRTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKPVGGR 545
           GG +L  Y  +RR+     G+    +A+  ++HRM+VG I+S A I+++     K  GG+
Sbjct: 447 GGLSLTAYPDYRRVEPDEHGIWRVPDARLARRHRMSVGTIVSDASIHLKYWS--KGGGGK 504

Query: 546 KIGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKFPLST 605
            +G  EEG+  +L PGD F+FAG++     +    AYV  +      +P W G + PLS 
Sbjct: 505 NLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVRRSTAKKAAVPRWNGGRMPLSN 564

Query: 606 YLAERVRQMM-------HDEREWSALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRF 658
            LA+ V +         +D  E  A+   +Q  L W    S +P    +L E     + +
Sbjct: 565 ELAQAVVERFDAAAHGHYDGPEMQAVQPLLQTQLRW----SGLPTRKHLLAEALKSREGW 620

Query: 659 HMVCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMDDLDL--DELF 716
           H+  YPF GR  H  LA LL  R+ +          NDY L L S   ++  +L    L 
Sbjct: 621 HLFLYPFAGRQVHLGLASLLAWRVSQRQPVTFSIAVNDYGLELLSATEVEWPELLDPTLL 680

Query: 717 AQDMLGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLRK 776
             + L  D+ A L+   +  R F+  A IAGL+   +PGA KS RQV  S+ L ++V ++
Sbjct: 681 GPEHLLHDVSASLNAGELALRRFREIARIAGLVFAGYPGAPKSTRQVQASSGLFFEVFKQ 740

Query: 777 HQPDHLMLRCARLDAATGLLDIARLGDMLTRVRGRIRHV-ALDRVSPFAVPMMLEIGRER 835
           + P +L+L  A  +     LDI RL + L  +      V  ++R +P A P+++E  RE 
Sbjct: 741 YDPQNLLLTQAGEEVLRDELDIRRLEETLLHMAALQLDVHVIERPTPLAFPLLVERMRES 800

Query: 836 APGDAAGEMI 845
              +   E I
Sbjct: 801 MSSEKLSERI 810