Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC99

 Score =  264 bits (674), Expect = 3e-74
 Identities = 245/896 (27%), Positives = 368/896 (41%), Gaps = 117/896 (13%)

Query: 9   PQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERPPRN 68
           P  + WF +    P   Q      A  G  AL+IAPTG GKTLA FL +L  L      +
Sbjct: 17  PATRDWFLRAFKQPTAVQSQTWHVAARGEHALVIAPTGSGKTLAAFLYALDRLFREGGED 76

Query: 69  TPAG-----VHTLYISPLKALAVDVERNLLTPIR----------EMGLPIVAESRTGDTG 113
           T           LYISP+KAL  DV+RNL  P++          E  + +    RTGDT 
Sbjct: 77  TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136

Query: 114 ESRKARQKVRPPDILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLAL 173
              +++    PPDIL+TTPE L L      ARE    +  VIIDE HA+  SKRG  LAL
Sbjct: 137 AQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLAL 195

Query: 174 GLSRLQQFA-PNMRRVGLSATVDDPDLVRKWLGVNR---VENPPPRAGEVSAEPTEGAST 229
            L RL      + +R+GLSATV     V  +LG +R   V NPP                
Sbjct: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR------------- 242

Query: 230 ADLQLALSGPPGHLPRAQGRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAE---H 286
                                  P I +V+       V  V    G    AG       +
Sbjct: 243 ----------------------HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPY 280

Query: 287 AMAEVYDIIKAAKTALVFVNTRFQAEFAFQRLWEL------------------------- 321
               + D +   ++ +VF N+R  AE    RL EL                         
Sbjct: 281 IETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAADAAHFESTSGAT 340

Query: 322 -----NDEGLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGIDWGDVDLVIQL 376
                + +      HHGS+S EQR   E A+  GELR VV TS+L++GID G V+LVIQ+
Sbjct: 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVELVIQV 400

Query: 377 AAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILENHLDGEPPRTGA 436
           A P   +  +QRIGRA H++   S+ +F P +R ++++     + +    L+   P    
Sbjct: 401 ATPLSVASGLQRIGRAGHQIGGISKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNP 460

Query: 437 LDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDFVSTGGYALRTYDKF 496
           LDVLAQH +  A  +  +  + Y  VR A P+ +L    F+A +D +S G Y    +  F
Sbjct: 461 LDVLAQHTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS-GRYPSGDFSAF 519

Query: 497 R--RIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKPVGGRKIGEAEEGY 554
           R   +     G+ TAR   A+     + G I    M ++ +  G +  G R++GE +E  
Sbjct: 520 RPKLVWNRETGILTARPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEQAGSRRVGELDEEM 578

Query: 555 FEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKFPLSTYLAERVRQM 614
             +    D        WR   +      V+PAP    ++P W G        L E +   
Sbjct: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638

Query: 615 MHDEREWSALPGDVQEWLSWQKI-----------RSA---IPAEGEMLLETF-PRGKRFH 659
           +H   + +   G +  WL+ +             R+A   +P    ++LE        + 
Sbjct: 639 LHLLADGAFFSGTIPPWLAEENTIANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWR 698

Query: 660 MVCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMDDLDLDE----L 715
           ++ +   GR  H   A+ +  R+  L       V +D    + +  P  D  L +    L
Sbjct: 699 IILHSPYGRRVHEPWALAIAGRIHALWGADASVVASDD--GIVARIPDTDGKLPDAAIFL 756

Query: 716 FAQDMLGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLR 775
           F  + L   +   +  S +    F+ CA  A L+  R PG      Q       + ++ +
Sbjct: 757 FEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQ 816

Query: 776 KHQPDHLMLRCARLDAATGLLDIARLGDMLTRVRG---RIRHVALDRVSPFAVPMM 828
            + PD   +     +    + D+  L  ++ R+ G   +I  V     SPFA  ++
Sbjct: 817 GY-PDFPAILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871