Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC62

 Score =  267 bits (682), Expect = 4e-75
 Identities = 249/903 (27%), Positives = 371/903 (41%), Gaps = 117/903 (12%)

Query: 2   LAANALPPQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIEL 61
           L  +   P  + WF +    P   Q      A     AL+IAPTG GKTLA FL +L  L
Sbjct: 10  LLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69

Query: 62  AERPPRNTPAG-----VHTLYISPLKALAVDVERNLLTPIR----------EMGLPIVAE 106
                 +T           LYISP+KAL  DV+RNL  P++          E  + +   
Sbjct: 70  FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQLPLKGIADERRRRGETEVNLRVG 129

Query: 107 SRTGDTGESRKARQKVRPPDILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSK 166
            RTGDT    +++    PPDIL+TTPE L L      ARE    +  VIIDE HA+  SK
Sbjct: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSK 188

Query: 167 RGDLLALGLSRLQQFA-PNMRRVGLSATVDDPDLVRKWLGVNR---VENPPPRAGEVSAE 222
           RG  LAL L RL      + +R+GLSATV     V  +LG +R   V NPP         
Sbjct: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR------ 242

Query: 223 PTEGASTADLQLALSGPPGHLPRAQGRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGH 282
                                         P I +V+       V  V  S G    AG 
Sbjct: 243 -----------------------------HPQIRIVVPVANMDDVSSVASSTGEDSHAGR 273

Query: 283 TAE---HAMAEVYDIIKAAKTALVFVNTRFQAEFAFQRLWELNDEGLP----IAL----- 330
                 +    + D +   ++ +VF N+R  AE    RL EL    L     IA+     
Sbjct: 274 EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF 333

Query: 331 ---------------------HHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGIDWGD 369
                                HHGS+S EQR   E A+  GELR VV TS+L++GID G 
Sbjct: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393

Query: 370 VDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILENHLDG 429
           VDLVIQ+A P   +  +QRIGRA H++   S+ +F P +R ++++     + +    L+ 
Sbjct: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN 453

Query: 430 EPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDFVSTGGYA 489
             P    LDVLAQ  +  A  E  +  + Y  VR A P+ +L    F+A +D +S G Y 
Sbjct: 454 LTPPHNPLDVLAQQTVAAAAMEALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS-GRYP 512

Query: 490 LRTYDKFR--RIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKPVGGRKI 547
              +  FR   +     G+ TAR   A+     + G I    M ++ +  G +  G R++
Sbjct: 513 SGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571

Query: 548 GEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKFPLSTYL 607
           GE +E    +    D        WR   +      V+PAP    ++P W G        L
Sbjct: 572 GELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAEL 631

Query: 608 AERVRQMMHDEREWSALPGDVQEWLSWQKIRS--------------AIPAEGEMLLETF- 652
            E +   +H   + +   G +  WL+ +   +               +P    ++LE   
Sbjct: 632 GEMIGDFLHLLADGAFFSGTIPPWLAEENTNANIQGLIDEQRNATGIVPGSRHLVLERCR 691

Query: 653 PRGKRFHMVCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMDDLDL 712
                + ++ +   GR  H   A+ +T R+  L       V +D    + +  P  D  L
Sbjct: 692 DEIGDWRIILHSPYGRRVHEPWALAITGRIHALWGADASVVASDD--GIVARIPDTDGKL 749

Query: 713 DE----LFAQDMLGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTD 768
            +    LF  + L   +   +  S +    F+ CA  A L+  R PG      Q      
Sbjct: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809

Query: 769 LIYDVLRKHQPDHLMLRCARLDAATGLLDIARLGDMLTRVRG---RIRHVALDRVSPFAV 825
            + ++ + + PD  ++     +    + D+  L  ++ R+ G   +I  V     SPFA 
Sbjct: 810 QLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFAT 868

Query: 826 PMM 828
            ++
Sbjct: 869 SLL 871