Pairwise Alignments

Query, 262 a.a., exodeoxyribonuclease III from Caulobacter crescentus NA1000

Subject, 259 a.a., Catabolite repression control protein from Pseudomonas putida KT2440

 Score = 63.2 bits (152), Expect = 5e-15
 Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 15/261 (5%)

Query: 1   MRIATWNVNSINARLE-GVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQ 59
           MRI + NVN I A  E G+L+W +++  DV  LQ+ +    +    AF+  GY +     
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 60  KT--YNGVALLSKHPIEDVRKGLPFLSEDEVDEQARYIEAVIAAPTPFRVVGIYLPNGNP 117
           +     GVAL S+   + V  GL F   +  D   RY++A     +   +  + LP+G  
Sbjct: 61  EVPAQGGVALYSRMQPKAVITGLGF---ETADRYGRYLQADFDKVS---IASLLLPSGMN 114

Query: 118 IGTEKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVANPQAWLGDALFQPE 177
            G E    K   M     +           +  G + V  +  D+ N +       F   
Sbjct: 115 -GDEDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAP 173

Query: 178 SRAAFRALKN-LGFADAYMQADGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLT 236
            RA   A+   +G+ DA  +       Y++W     A   NLG R D+ +L+P     + 
Sbjct: 174 ERAWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVR 233

Query: 237 GLVIHRDERDKEKPSDHVPVV 257
              + R  R     S H P++
Sbjct: 234 NARLPRQPRF----SQHAPLI 250