Pairwise Alignments

Query, 262 a.a., exodeoxyribonuclease III from Caulobacter crescentus NA1000

Subject, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 8e-35
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 15/268 (5%)

Query: 1   MRIATWNVNSINARLEGVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQK 60
           M+I  +N+N + AR   + A  E   PDV  LQE K  D++FP    + LGY+V  HGQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 61  TYNGVALLSKHPIEDVRKGLPFLSEDEVDEQARYIEAVIAAP--TPFRVVGIYLPNGNPI 118
            + GVALLS+ P   + KG    + DE D Q R+I    A    +P  ++  Y P G   
Sbjct: 61  GHYGVALLSRQPPLSLHKG---FATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESR 117

Query: 119 G-TEKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVA----NPQAWL--GD 171
               KF  K  +   L A  +     ++P+++ GD N+ P+  D+     N + WL  G 
Sbjct: 118 DHPTKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGK 177

Query: 172 ALFQPESRAAFRALKNLGFADAYMQA-DGAPGGYTFWDYQAGAW--QRNLGIRIDHLLLS 228
             F PE R     LK  G  D++          ++++DY++  +  +   G+RID ++ S
Sbjct: 178 CSFLPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMAS 237

Query: 229 PQAADRLTGLVIHRDERDKEKPSDHVPV 256
            Q   R+    +  + R  EKPSDH P+
Sbjct: 238 QQLVPRIKAAGVDYELRGMEKPSDHAPI 265