Pairwise Alignments

Query, 228 a.a., NADH-quinone oxidoreductase chain E from Caulobacter crescentus NA1000

Subject, 290 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  236 bits (603), Expect = 3e-67
 Identities = 123/203 (60%), Positives = 142/203 (69%), Gaps = 2/203 (0%)

Query: 1   MSVRRLAKEQPASFAFSKDSQAKADWWKAKYPAERKQSAVIPMLWLAQKQEG-WISEPAI 59
           MSVRRLA EQP SF+F+ + +A A    AKYP  R+ SAV+P+LW  QK  G W+ EPAI
Sbjct: 1   MSVRRLAAEQPESFSFTPELEAIAQKLIAKYPEGRQASAVVPLLWETQKAAGGWLPEPAI 60

Query: 60  QEIAKQLEMPVIRVLEVATFYVMFQLQPVGKVAFVQLCGTTPCQLRGALDLRKVLEDKIG 119
           + +A +L M  IRVLE+ATFY MF L+PVGK  FVQLCGTTPC LRGA  ++ V E KIG
Sbjct: 61  RAVADRLGMANIRVLEIATFYTMFNLEPVGKY-FVQLCGTTPCMLRGAEAIKHVCEKKIG 119

Query: 120 PAHHVSADGKFSWEEVECLGACCNAPMAAINDYYYEDLTPESLAKILDDFAAGKAPKPGS 179
              HVSADG FSW EVECLGAC NAPM  IND YYEDLTPE+  K+LDD AAG+    G 
Sbjct: 120 HERHVSADGTFSWLEVECLGACTNAPMVQINDDYYEDLTPENFEKLLDDLAAGRPVSVGP 179

Query: 180 YEGRGASEPKGAIHTLTDPKLYD 202
              R  SEP+G    L DP LYD
Sbjct: 180 QNSRKGSEPEGGPRVLLDPALYD 202