Pairwise Alignments

Query, 228 a.a., NADH-quinone oxidoreductase chain E from Caulobacter crescentus NA1000

Subject, 369 a.a., NADH ubiquinone oxidoreductase chain E from Agrobacterium fabrum C58

 Score =  195 bits (496), Expect = 9e-55
 Identities = 117/232 (50%), Positives = 142/232 (61%), Gaps = 7/232 (3%)

Query: 1   MSVRRLAKEQ--PASFAFSKDSQAKADWWKAKYPAERKQSAVIPMLWLAQKQEGWISEPA 58
           MSVRRLA++Q  P +FAF+ D+ A A+    KYPA R+QSAVIP+L  AQ+Q+GW++  A
Sbjct: 1   MSVRRLAEDQFQPVAFAFNADNTAWAEKTIQKYPAGRQQSAVIPLLMRAQEQDGWVTRAA 60

Query: 59  IQEIAKQLEMPVIRVLEVATFYVMFQLQPVGKVAFVQLCGTTPCQLRGALDLRKVLEDKI 118
           I+++A  L+M  IRVLEVATFY  FQL+PVG  A VQ+CGTTPC LRG+  L  V   KI
Sbjct: 61  IEKVADMLDMAYIRVLEVATFYTQFQLKPVGTRAHVQVCGTTPCMLRGSEALMDVCRKKI 120

Query: 119 -GPAHHVSADGKFSWEEVECLGACCNAPMAAINDYYYEDLTPESLAKILDDFAAGKAP-- 175
                H +  G  SWEEVEC GAC NAPM  I    YEDLTPE L +I+D F AGK    
Sbjct: 121 HHDPLHTNDSGTLSWEEVECQGACVNAPMVIIFKDAYEDLTPERLEEIIDTFEAGKGDTV 180

Query: 176 KPGSYEGRGASEPKGAIHTLTDPKLYDGSYAKKIKIPNLPEKPKKAPKSEPA 227
           K G    R  S P G + TLT+    D S   K   P  P +    P S  A
Sbjct: 181 KTGPQIDRHESVPVGGLTTLTEEIKPDRSNLDKPAEP--PAEAAPVPPSNAA 230