Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 624 a.a., peptidylprolyl isomerase from Pseudomonas simiae WCS417

 Score =  105 bits (262), Expect = 6e-27
 Identities = 133/622 (21%), Positives = 244/622 (39%), Gaps = 69/622 (11%)

Query: 1   MLAGFRKFAKSPFAVVLFGLLIVSFAIFGISDVFK--GPQGSGVISAGSRSMSAIDFKQR 58
           ML   R  ++   A  + G+++   A  GI  +F+  G     V       ++  +  Q 
Sbjct: 1   MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQA 60

Query: 59  FDNYRKAMEQQNGTTLTPDQAVEQGVDRQIVQELVLQESLAAALHKMGVAPSDKLVADTV 118
            D  R+ + QQ G            +D ++++E  L+  +   L   G A S    ++  
Sbjct: 61  VDMQRRQLMQQLGKDFDASL-----LDEKLLREAALKGLIDRKLLLQGAADSKFGFSEAA 115

Query: 119 HEQMSQLPPTTRPFDPITGKFDSRAYATLMQQNGLTPETYEASLRDEIAQTHFFSAIADG 178
            +Q+    P  +    + GKF +  +  +++Q G +   +   L  E+            
Sbjct: 116 LDQVILQTPEFQ----VDGKFSAERFDQVIRQLGYSRMQFRQMLTQEML----------- 160

Query: 179 LKAPRIYAALQGAYLLEAREVSAFV---------------VNPSTVQRPNPPTDAQLTAF 223
               ++ A + G+  +   EV AF                 NP+ V+     TD ++ A+
Sbjct: 161 --IGQVRAGIAGSGFVTDSEVLAFARLEKQTRDFATVNIKANPAAVKL----TDDEVKAY 214

Query: 224 MKENADRLTRPETRVLSIMRVSATALEPSVTINPADVQKAFDFRKDSLA--RPETRTIVQ 281
             ++A     P+  V+  + +  ++    V++   ++Q A+     +LA  R     +++
Sbjct: 215 YDQHAKEFMTPDQVVIDYLELKKSSFFDQVSVKDEELQAAYQKETANLAEQRRAAHILIE 274

Query: 282 I--AAPDAKAAAVISQ---RLGKGEDPAAVAKAYGKTPLVLTDKPK-----SAVPDRKVA 331
           +     DA+A A I +   RL KGE   A+AK + + P               V D    
Sbjct: 275 VNDKVTDAQAKAKIEEIQARLAKGEKFEALAKEFSQDPGSANTGGDLGFAGPGVYDPDFE 334

Query: 332 DAAFALQTGQVSGPIIGDLGVAVVKVTKITPGAVATLDSVRPQIEAEVRSQTAQAKAYEQ 391
            A +AL   QVS P+    G  ++K+  +    V T  S++ ++  E+++Q  + +  E 
Sbjct: 335 TALYALNKDQVSAPVRSTFGWHLIKLLGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEA 394

Query: 392 TQTYQDARDAGADLISAASKAGALVITTAPVTAQGTDQMGQPFAGLTPDIIKTAFD---L 448
           T+  +DA    +DL   AS     V T+AP   +G + +    A     ++  AF    L
Sbjct: 395 TKQLEDAAFEASDLAQPASDLKLTVHTSAPFGREGGEGVAANRA-----VVTAAFSPEVL 449

Query: 449 SQGGESELVEAGKGEYYAVKVERIVPAALPPLAEVKPQLTAVWFGQEMAKRMKAKADELA 508
            +G  S  +E        ++ +  +  +  PL  V   +      +  +   KA ADEL 
Sbjct: 450 DEGANSTAIELDPETIIVLRAKEHLKPSQLPLESVSAAIRTQMAKERASAAAKAHADELI 509

Query: 509 ARVKKGESLEAVATAAQSNVQKIPGGLTR-QNAQQHVALGQEFLGAAFTAKPGAVFTARA 567
           A ++ G++   +         K+    TR Q A     L   F       K    FT   
Sbjct: 510 ASLRDGKT--PLNQPVDGQAWKVTEAATRSQEAIDPAVLQALFRMPKPATKDKPTFTTVT 567

Query: 568 GQQGQAYVVAKLDAVR--AAPT 587
              G + V+ +L+ V   AAPT
Sbjct: 568 LADG-SLVIVRLNGVNEAAAPT 588