Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 640 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Variovorax sp. SCN45

 Score =  127 bits (318), Expect = 2e-33
 Identities = 158/637 (24%), Positives = 251/637 (39%), Gaps = 71/637 (11%)

Query: 1   MLAGFRKFAKSPFAVVLFGLLIVSFAIFGISDV--FKGPQGSGVISAGSRSMSAIDFKQR 58
           M   FRK  K    + LF L+I SF  FG+     F G +    I     +    D + R
Sbjct: 1   MFEAFRKHTKIVM-IFLFLLIIPSFVFFGVERYQGFGGDEKVARIEGHDITRPEWDQQHR 59

Query: 59  FDNYRKAMEQQN-GTTLTPDQAVEQGVDRQIVQELVLQESLAAALHKMGVAPSDKLVADT 117
            +  R   +  N   TL    A+      ++V++ VL    AAA  K  +  S+    D 
Sbjct: 60  VETDRIRQQSPNVDPTLLESDALRYATLERMVRDRVL----AAAAAKANMTVSE----DR 111

Query: 118 VHEQMSQLPPTTRPFDPITGKFDSRAYATLMQQNGLTPETYEASLRDEIAQTHFFSAIAD 177
           +    +Q  P    F    GKFD     T  +  G TPE YEAS+R ++A       I+ 
Sbjct: 112 LSRIFAQ-DPGLASFRTPDGKFDRE---TFQRVTGRTPEQYEASVRADMATQQVMLGISG 167

Query: 178 -GLKAPRIYAALQGAYLLEAREVSAFVVNPSTVQRPNPPTDAQLTAFMKENADRLTRPET 236
               +P + A    A+  ++RE+     NP T       +DA + A+ K++A +   PE 
Sbjct: 168 TAFTSPALAATTINAFY-DSREIQVARFNPETFASKVTVSDADIEAYYKDHASQFQAPEQ 226

Query: 237 RVLSIMRVSATALEPSVTINPADVQKAFDFRKDSLARPETR-----TIVQIAAPDAKAAA 291
             +  + +   A + ++++N  D++  +   K++ AR  T+     + + I AP +  AA
Sbjct: 227 ANIEYLVLDLDAAKKNISVNEDDLKTYY---KENAARFGTKEERRASHILITAPSSMPAA 283

Query: 292 VISQRLGKGEDPAAVAKAYGKTPLVLTDKPKSAVPD-------------------RKVAD 332
              +   K E   A  K   K P    D  +    D                   +   D
Sbjct: 284 DREKAKAKAEALLAEVK---KAPNTFADVARKNSQDPGSAEKGGDLDFVTRGAMVKPFED 340

Query: 333 AAFALQTGQVSGPIIGDLGVAVVKVTKITPGAVATLDSVRPQIEAEVRSQTAQAKAYEQT 392
           A FAL+ G++S  I  + G  ++ +T I P  V   + VR  IE++VRSQ A  +  +  
Sbjct: 341 AMFALKKGEISNVIETEFGYHIIHLTDIKPAVVPPFEQVRATIESDVRSQQATQEFAKAA 400

Query: 393 QTYQDARDAGADLISAASKAGALVITTAPVTAQGTDQMGQPFAGLTPDIIKTAF------ 446
           + + DA     D +  A+    L I TA   A+       P  G T  +    F      
Sbjct: 401 EAFTDAVYQTPDSLKPAADKLKLTIQTANNVAR------TPVPGATGPLASRNFLNALFA 454

Query: 447 --DLSQGGESELVEAGKGEYYAVKVERIVPAALPPLAEVKPQLTAVWFGQEMAKRMKAKA 504
              L +   +E +E G  +  + +V    PA   PLAEVK ++ A    +  A       
Sbjct: 455 PDSLQRKQNTEAIEVGANQLASGRVTTYAPAHPVPLAEVKDKIRAQLINERAA------- 507

Query: 505 DELAARVKKGESLEAVATAAQSNVQKIPGGLTRQNAQQHVALGQEFLGAAFTAKPGAVFT 564
             + A+ +    L A  T A       P  ++R++A        +    A  AK   +  
Sbjct: 508 --VLAKTEGEAKLAAWTTKADGATFGAPMTVSRRDAASQPLPVIDAALRADAAKLPTLVG 565

Query: 565 ARAGQQGQAYVVAKLDAVRAAPTANVAQIAVLAQGQA 601
              G QG A V       R  P A +A+      GQ+
Sbjct: 566 VDLGAQGYAVVRVTKVVPRTPPPAELAKQEQTQVGQS 602