Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 626 a.a., peptidylprolyl isomerase from Dickeya dianthicola 67-19

 Score =  110 bits (274), Expect = 3e-28
 Identities = 119/605 (19%), Positives = 235/605 (38%), Gaps = 49/605 (8%)

Query: 1   MLAGFRKFAKSPFAVVLFGLLIVSFAIFGISDVFKGPQGSGVISAGSRSMSAIDFKQRFD 60
           M+   R  A +    ++  L+I SF + G+ D      G        + ++    +Q   
Sbjct: 1   MMDNLRAAANNVVLKIILALIIGSFVLTGVGDYLIRGSGDYAAKVNGQEITQAQLEQGVQ 60

Query: 61  NYRKAMEQ---QNGTTLTPDQAVEQGVDRQIVQELVLQESLAAALHKMGVAPSDKLVADT 117
           N R   ++   +N + L  ++   Q + +Q++ +L+ +  +    H +G+  SD+ V   
Sbjct: 61  NERSRQQEMLGENFSALAANEGYMQQLRKQVLSQLIDETLVVQYAHTLGLNISDEQVKQA 120

Query: 118 VHEQMSQLPPTTRPFDPITGKFDSRAYATLMQQNGLTPETYEASLRDEIAQTHFFSAIAD 177
           +            P      +FD+  Y   ++Q GLT + Y   LR ++        + +
Sbjct: 121 IFSV---------PEFQTNNRFDNDKYLAQVRQLGLTSDAYAQFLRKQLLTQQLIRGLGN 171

Query: 178 GLKAPRIYAALQGAYLLEAREVSAFVVNPSTVQRPNPPTDAQLTAFMKENADRLTRPETR 237
                +       A   + R +    ++ S   R    +D ++  F  +N  R   PE  
Sbjct: 172 TGFVLQQELDNLVAMAAQDRTIRTATIDLSARARNQAVSDEEVKNFYNQNKSRYLAPEQF 231

Query: 238 VLSIMRVSATALEPSVTINPADVQKAFDFRKDSLARPETR--TIVQIAAPDAKAAAVISQ 295
            +S + + A ++     ++  D+   ++ RK    +PE +  +++Q+   +A A AV+ Q
Sbjct: 232 KVSYIMLDAASIMDKAKVDNTDIAAYYEQRKSEFTQPERKKYSVIQLKT-EADARAVLEQ 290

Query: 296 RLGKGEDPAAVAKAYGKTPLVLTDKPKSAVPDRKVAD--------------AAFALQTGQ 341
            L KG D AA+AK          +K    V  R   D               A   Q GQ
Sbjct: 291 -LKKGADFAALAK----------EKSTDIVSRRNGGDLGWMDGGSTVDEIKQAGLKQKGQ 339

Query: 342 VSGPIIGDLGVAVVKVTKITPGAVATLDSVRPQIEAEVRSQTAQAKAYEQTQTYQDARDA 401
           +S  I   +G  ++++  I    V  LD VR  +  +V+ + +    Y Q Q   +A   
Sbjct: 340 LSDVIKSSVGYLIIRLDDIQAQRVKALDEVRADLAEKVKREKSLDAFYSQQQKLSEAASN 399

Query: 402 GADLISAASKAGALVITTAPVTAQGTDQMGQPFAGLTPDIIKTAF---DLSQGGESELVE 458
             + +++A K   +         +        F  +T  I   +    + + G  S+++ 
Sbjct: 400 DNESLASAEKVANIKAVQTDWFTRENVPAALNFQPVTQAIFGGSLVGENGTPGNNSDVIS 459

Query: 459 AGKGEYYAVKVERIVPAALPPLAEVKPQLTAVWFGQEMAKRMKAKADELAARVKKGESLE 518
                 + ++V    P A  PL +V+ Q+      Q+  ++ K +A+++ A + +G++  
Sbjct: 460 VEGDRAFVLRVTEHKPEATQPLDQVREQVVQTLKRQKAEQQAKVEAEKILADLYQGKTDS 519

Query: 519 AVATAAQSNVQKIPGGLTRQNAQQHVALGQEFLGAAFTAKPGAVFTARAGQQGQAYVVAK 578
             A     +  K        +  Q  AL +         K    +     Q G   ++A 
Sbjct: 520 MTAAGLSFSAAK-----EMSSTGQTDALAETVFAMQQPKKDKPSYAVAQDQAGNVVLIA- 573

Query: 579 LDAVR 583
           LDAV+
Sbjct: 574 LDAVK 578