Pairwise Alignments

Query, 1207 a.a., urea carboxylase from Caulobacter crescentus NA1000

Subject, 1175 a.a., Urea carboxylase (EC 6.3.4.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 1410 bits (3650), Expect = 0.0
 Identities = 739/1213 (60%), Positives = 874/1213 (72%), Gaps = 46/1213 (3%)

Query: 1    MFDKVLIANRGAIACRIIRTLRAMGVKSVAVFSDADAGSLHVSMADEAVRLGPAPAAESY 60
            MF KVLIANRGAIACRIIRTL+ +GV+SVAV+S+ADA + HV  ADEA  LGPAPAAESY
Sbjct: 1    MFSKVLIANRGAIACRIIRTLKTLGVRSVAVYSEADAQARHVREADEAHLLGPAPAAESY 60

Query: 61   LRADLVLAAAQATGAQAIHPGYGFLSESAAFAQACEDAGVTFIGPSADNIRAFGLKHTAR 120
            LRAD +L  A+  GAQAIHPGYGFLSE+ AFA+ACE AG+ FIGP+   +RAFGLKHTAR
Sbjct: 61   LRADRILQIAKDCGAQAIHPGYGFLSENPAFAEACEAAGIAFIGPAPQQMRAFGLKHTAR 120

Query: 121  DLAQAHGVPLAPGTDLLTDPAAALAAAQRIGFPVILKATAGGGGIGMRVCESAEAVEEAF 180
            DLAQA GVPL PG+ LL D A A A A RIG+PV+LK+TAGGGGIGMR+  +   + +AF
Sbjct: 121  DLAQARGVPLLPGSGLLLDLAQATAEAARIGYPVMLKSTAGGGGIGMRLVWNDTELRDAF 180

Query: 181  AAVRRLATGNFSDGGVFLERYVHKARHIEVQVFGDGAGRVAALGERDCSLQRRNQKVVEE 240
             +V RLA  NF D G+FLE+YV +ARHIEVQVFGDGAG V ALGERDCS+QRRNQKV+EE
Sbjct: 181  ESVGRLAQANFKDAGLFLEKYVEQARHIEVQVFGDGAGGVIALGERDCSVQRRNQKVIEE 240

Query: 241  TPAPGLPAATRTALLDAAVRLAKAANYRSAGTVEFLYDADRDDFFFLEVNTRLQVEHGVT 300
            TPAPGL  A RT L   AVRLA+A NYRSAGTVEF+YDA    F+FLEVNTRLQVEHGVT
Sbjct: 241  TPAPGLSDAQRTELHATAVRLAQAVNYRSAGTVEFVYDAASGAFYFLEVNTRLQVEHGVT 300

Query: 301  EQVTGVDLVEWMVRGAAGDFSFLDTPPPAPRGAAIQVRLYAEDPAQDYRPSAGVLTEVAF 360
            EQV GVDLV WM++ AAGD   L T  P PRGA+IQVRLYAEDPA++++PSAG+LT+V F
Sbjct: 301  EQVCGVDLVAWMLQLAAGDLPPLATLQPVPRGASIQVRLYAEDPAKNFQPSAGLLTDVVF 360

Query: 361  PEGVRADGWVVDGTEVSAFYDPMLAKLIVIAEHRPAAVAALQAALDATRLAGIETNLDWL 420
            P   R D WV  GTEV A+YDPMLAKLIV A+ R  A+  L+ ALDATRLAGIETNL +L
Sbjct: 361  PPRARVDSWVERGTEVPAWYDPMLAKLIVTADTREQALLQLEDALDATRLAGIETNLGYL 420

Query: 421  RTVTRSQPFVSGEVSTRALETIAWAPDTIQVLSGGPATTVQDWPGRRGYWDVGVPPSGPM 480
            R V R   F  G   TR L T  + P TI VL  G  T+VQD PGR+GYW VGVPPSGPM
Sbjct: 421  RQVVRDPVFREGRQVTRFLATFDFKPRTIDVLEPGVQTSVQDSPGRQGYWAVGVPPSGPM 480

Query: 481  DALAFRLGNRLLANPDDAAGLEITALGPTLKFNRPATLCLTGARFDARLDGVAVEPYTPF 540
            D  A R+ N+L+ N  DAA LEIT  GPTL+FN    + +TGA     L+G  V  +   
Sbjct: 481  DTHAHRMANQLVGNASDAAALEITLAGPTLRFNVATVVAVTGAPAKLTLNGQPVAMWQAL 540

Query: 541  DVRPGQTLKIGRVVEAGLRGYLLLRGGLDVPTYLGSRSTFTLGGFGGHAGRNLTAGDVLR 600
             V  G TL +GR  E G+R  L + GGLDVP YLGSRSTFTLG FGGHAGR+L  GDVL 
Sbjct: 541  AVPAGATLAVGR-CETGVRLALAVAGGLDVPLYLGSRSTFTLGQFGGHAGRHLRTGDVLH 599

Query: 601  LLPAPEAPPGAL--DEPLRPALTKTWTIRVLPGPHGAPDFFTPADVAMIGGTDWKVHYNS 658
            L  AP +       D    P  T  W I VL GPHGAPDFFTP D+AM  GTDWKVH+NS
Sbjct: 600  LADAPASVEAQTMSDYVYAPEYTNHWDIDVLYGPHGAPDFFTPEDIAMFFGTDWKVHHNS 659

Query: 659  NRTGVRLVGPKPEWARRDGGEAGLHPSNIHDNAYAIGAIDFTGDMPIILGPDGPSLGGFV 718
            +RTGVRL+GPKP+WAR DGGEAGLHPSNIHDNAYAIGAIDFTGDMP+ILGPDGPSLGGFV
Sbjct: 660  SRTGVRLIGPKPQWARSDGGEAGLHPSNIHDNAYAIGAIDFTGDMPVILGPDGPSLGGFV 719

Query: 719  CPFVIIEADLWKAGQLAPGDTVRFAVVDDPTAAAALETQEALIAQLGAAPPRPAPAVIDV 778
            CP V++  +LWK GQL PGDTV F                       A  P         
Sbjct: 720  CPAVVLHDELWKLGQLRPGDTVHF--------------------HRRAGSP--------- 750

Query: 779  EASPILRELPQDGHRPRVLYRRQGDQHLLVEYGPIVLDLELRLRIHALLLDLQAQALEGV 838
             ASPIL +   +G RPR + R+ GD+++L+E+GP+ LDLELR+R+ ALL  L+ + L GV
Sbjct: 751  -ASPILDDRAAEGERPRRVVRQAGDRYVLIEFGPLTLDLELRMRVQALLEGLKRKHLGGV 809

Query: 839  IDLTPGIRSLQVHYDSRRLSQARLLDILVAAEDRLGGLDDFEIPSRVVHLPLSWKDPAIY 898
            IDLTPGIRSLQVH+D  RL + +LL ++   +D L  +D+  +PSR V LPLSW DP   
Sbjct: 810  IDLTPGIRSLQVHFDPTRLPREQLLRVIAEVDDALPPVDEMVVPSRTVVLPLSWDDPQTK 869

Query: 899  QTIDKYMQAVRDDAPWCPDNIEFIRRVNGLNGIDDVQKIVFDARYLVMGLGDVYLGAPVA 958
              I+KYMQ+VR DAPWCP NIEFIRR+NGL+ I+DV ++VFDARYLV+GLGDVYLGAPVA
Sbjct: 870  LAIEKYMQSVRPDAPWCPSNIEFIRRINGLDSIEDVFQVVFDARYLVLGLGDVYLGAPVA 929

Query: 959  TPVDPRHRLVTTKYNPARTWTPPNVVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTWRQ- 1017
            TP+DPRHRLVTTKYNPARTWTP N VGIGGAY+C+YGMEGPGGYQ  GRT+Q+WN WR  
Sbjct: 930  TPLDPRHRLVTTKYNPARTWTPENAVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNRWRHG 989

Query: 1018 TDAFTDGKPWLLRFFDQIRFFPVSAEELVEWRRDFPLGRRAIRIEEETFRLSDYRRLLAE 1077
            T      +PWLLRFFDQIRF PVS + L + R  FP G  A+R E+ TF L DYRR LAE
Sbjct: 990  TPGTPFEQPWLLRFFDQIRFEPVSEDALKDIRARFPHGGYALRTEDGTFSLKDYRRFLAE 1049

Query: 1078 NAESIAAFQSRRQAAFDAERADWEAKGEFARVEALSGVAEADDAVAAVE----VPAGADL 1133
            N E+I+AF++R+QAAF+AER  W A G+      +   +EAD + A VE    +P G   
Sbjct: 1050 NGEAISAFKTRQQAAFEAERERWAAAGQ------VDYASEADVSAAGVEAEIDLPEGGRA 1103

Query: 1134 VEAPLGGNVWKVLVEPGQAVEAGAVIAIIEAMKAECDVATPTAGVVSAVYAQPGQPIAAG 1193
            +   + GNVWKV V  GQ V+AG V+ +IE+MK E ++  P    V ++    G  +AAG
Sbjct: 1104 LATSVPGNVWKVAVSVGQQVQAGDVLLVIESMKMEFNLLAPANATVHSLMCAQGGSVAAG 1163

Query: 1194 APVIAVTPVAEAA 1206
              V+ +  + EAA
Sbjct: 1164 QNVLVL--IDEAA 1174