Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

 Score =  519 bits (1337), Expect = e-151
 Identities = 308/753 (40%), Positives = 445/753 (59%), Gaps = 40/753 (5%)

Query: 16  DRILDEPLTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLYAMSNMRLNPDAAARK 75
           D +    L +   + YL Y++  I  RALP + DGLKPV RR++YAMS + L+ DA  +K
Sbjct: 10  DGVERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKK 69

Query: 76  CAKVVGEVMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFGNIDGD-SAAAMRYTE 134
            A+ VG+V+G FHPHGD++ Y+A+V +AQ FS R  LV+GQGN+G  D   S AAMRYTE
Sbjct: 70  SARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTE 129

Query: 135 CKMTEAAMLLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANGSSGIAVGMATSIPP 194
            +++  A +LL  + +  VD+ P +DG  +EP VLP+  PN+L NG++GIAVGMAT +PP
Sbjct: 130 ARLSRYAEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPP 189

Query: 195 HNAAELIDACQLLLANPDATTADLLEKVPGPDFPTGGVIVESRASLLETYETGRGGVRMR 254
           HN  E+  AC  LL  P AT   L E + GPD+PT   IV  RA +L+ YE+GRG +RMR
Sbjct: 190 HNLREVASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMR 249

Query: 255 AKWEKEDTGRGTYQIVVTEIPYQVKKSDLVEQLADLIDSKKAALLGDVRDESAED--IRL 312
           A +  ED       IVVT +P+QV  + ++EQ+A  + +KK  ++ D+RDES  +   R+
Sbjct: 250 AVYRVEDG-----DIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRI 304

Query: 313 VLEPKSKNVEPEVLMESLFKLSALESRFPVNINVLDARGTPGVMGIKQALMAFLAHRREV 372
           V+ P+S  V+ + LM+ LF  + LES + VN+N++   G P +  ++  L+ +L  R   
Sbjct: 305 VIIPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNT 364

Query: 373 LTRRARHRLAKIEARLHILDGLLIAYLNLDEVIRIVRYEDKPKEKLIETFGLTDIQADAI 432
           + RR +HRL K+E RLH+LDGLL A+LNLDEVI I+R E+ PK+ LIE F LT+IQAD I
Sbjct: 365 VRRRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQALIERFELTEIQADYI 424

Query: 433 LNTRLRQLAKLEEMEIRREHAELVEERDGILAMLASEAKQWKLVGVGLSEVRAALLKIKH 492
           L TRLRQLA+LEEM+IR E  EL++E+  + A+L SEAK  KL       VR+ L+K   
Sbjct: 425 LETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKLRKL-------VRSELIKDAE 477

Query: 493 PLDKPRPTGVTGRSVFGEAPQVDADAAIE-AMIVREPITIILSERGWIRAAKGKIDDPSE 551
                R + +  R+        +A A  E  ++  EP+T++LSE+GW+R AKG   D + 
Sbjct: 478 TYGDDRRSPIVARA--------EAKALSENELMPTEPVTVVLSEKGWVRCAKGHDIDATG 529

Query: 552 LKFKEGDKLGFLVPAETTDKLLIFSSDGRFFTLGCDKLPSARGHGEPVRMMIELDDKVKI 611
           L +K GD         +    ++  S GR ++L    LPSARG GEP+   +        
Sbjct: 530 LSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTPPPGATF 589

Query: 612 IDVFPFKAGRKRILASKGGYGFLMPEEEALANRKAGKQVLNVGNEGAAFCLEAVGDQ--- 668
             V         ++AS  GYGF++  E+  A  KAGK +L++ N         V D+   
Sbjct: 590 ECVLLPDDDALYVVASDAGYGFVVKGEDLQAKNKAGKGLLSLPNGAKVMTPRPVADREQD 649

Query: 669 -LAVIGDNGKILIFPLEELPEMPRGKGVKL-------QAYREGGLRDGLSFNAETGAYWI 720
            LA +   G++L+F + +LP++ +GKG K+        A RE  + D L+   E GA  +
Sbjct: 650 WLAAVTTEGRLLVFKVSDLPQLGKGKGNKIIGVPGDRVASREEFVTD-LAVIPE-GATLV 707

Query: 721 DTAGRRR---DWAEWKEWVGRRAGAGKLVPKGF 750
             AG+R       + + + G R   G  +P+GF
Sbjct: 708 LQAGKRTLSLKADDLEHYKGERGRRGSKLPRGF 740