Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 758 a.a., DNA topoisomerase IV subunit A from Dickeya dianthicola ME23

 Score =  506 bits (1303), Expect = e-147
 Identities = 292/702 (41%), Positives = 419/702 (59%), Gaps = 28/702 (3%)

Query: 13  DDGDRILDEPLTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLYAMSNMRLNPDAA 72
           D  +R+     TE     YL Y++  I  RALP + DGLKPV RR++YAMS + L+  A 
Sbjct: 7   DGAERLALHTFTE---NAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLSASAK 63

Query: 73  ARKCAKVVGEVMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFGNIDGD-SAAAMR 131
            +K A+ VG+V+G +HPHGD++ Y+A+V +AQ FS R PLV+GQGN+G  D   S AAMR
Sbjct: 64  FKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMR 123

Query: 132 YTECKMTEAAMLLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANGSSGIAVGMATS 191
           YTE ++++ A +LL  + +  VD+ P +DG  +EP +LP+  PN+L NG++GIAVGMAT 
Sbjct: 124 YTESRLSKYAEVLLGELGQGTVDYVPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMATD 183

Query: 192 IPPHNAAELIDACQLLLANPDATTADLLEKVPGPDFPTGGVIVESRASLLETYETGRGGV 251
           IPPHN  E+  A   L+  PD     LL  V GPDFPT   I+  R  + + YE+GRG V
Sbjct: 184 IPPHNVREVAAAAMALIDEPDTQLDALLRHVQGPDFPTEAEIITPRDEIRKMYESGRGSV 243

Query: 252 RMRAKWEKEDTGRGTYQIVVTEIPYQVKKSDLVEQLADLIDSKKAALLGDVRDESAED-- 309
           RMRA W+KED       +V+T +P+QV  + ++EQ+A  + +KK  +L D+RDES  +  
Sbjct: 244 RMRAVWKKEDGS-----VVITALPHQVSGARVLEQIASQMRAKKLPMLDDLRDESDHENP 298

Query: 310 IRLVLEPKSKNVEPEVLMESLFKLSALESRFPVNINVLDARGTPGVMGIKQALMAFLAHR 369
            RLVL P+S  ++ + +M  LF  + LE  + +N+N++   G P V G+++ L  +LA R
Sbjct: 299 TRLVLVPRSNRIDFDQVMNHLFATTDLEKSYRINMNMIGLDGRPSVKGLREILTEWLAFR 358

Query: 370 REVLTRRARHRLAKIEARLHILDGLLIAYLNLDEVIRIVRYEDKPKEKLIETFGLTDIQA 429
           R+ + RR   RL K+  RLHIL+GLLIA+LN+D+VI I+R ED+PK  L+  FGL+D QA
Sbjct: 359 RDTVRRRLNFRLDKVLKRLHILEGLLIAFLNIDDVIHIIRNEDEPKPVLMAKFGLSDTQA 418

Query: 430 DAILNTRLRQLAKLEEMEIRREHAELVEERDGILAMLASEAKQWKLVGVGLSEVRAALLK 489
           +AIL  +LR LAKLEEM+IR E  +L +ERD + A+LASE K               LLK
Sbjct: 419 EAILELKLRHLAKLEEMKIRGEQDDLAKERDQLQALLASERKM------------NTLLK 466

Query: 490 IKHPLDKPRPTGVTGRSVFGEAPQVDADAAIEAMIVREPITIILSERGWIRAAKGKIDDP 549
            K   +  +  G   RS   E  +  A +  + +   EP+TI+LSE GW+R+AKG   DP
Sbjct: 467 -KEIQEDAKAYGDERRSPLHERGEAKAMSEHD-LSPSEPVTIVLSEMGWVRSAKGHDIDP 524

Query: 550 SELKFKEGDKLGFLVPAETTDKLLIFSSDGRFFTLGCDKLPSARGHGEPVRMMIELDDKV 609
           S L +K GD        ++   ++   S GR + L    LPSARG GEP+   + L    
Sbjct: 525 SGLSYKAGDAYRAAARGKSNQPVVFMDSTGRSYALDPLTLPSARGQGEPLTGKLTLPPGA 584

Query: 610 KIIDVFPFKAGRKRILASKGGYGFLMPEEEALANRKAGKQVLNVGNEG---AAFCLEAVG 666
            I  V      ++ +LAS  GYGF+    + +A  + GK VL + +     A   L+   
Sbjct: 585 TIEQVLMAADNQRLLLASDAGYGFICTFADLVARNRVGKAVLTLPDHSRVLAPLELQRDD 644

Query: 667 DQLAVIGDNGKILIFPLEELPEMPRGKGVKLQAYREGGLRDG 708
           D L  +   G++L+FP+ +LPE+ +GKG K+ +     L  G
Sbjct: 645 DLLLTVTAAGRMLLFPVADLPELSKGKGNKIVSIPAAQLASG 686