Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola 67-19

 Score =  422 bits (1086), Expect = e-122
 Identities = 279/738 (37%), Positives = 410/738 (55%), Gaps = 85/738 (11%)

Query: 23  LTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLYAMSNMRLNPDAAARKCAKVVGE 82
           + E L   YL YA+S I  RALPDVRDGLKPVHRRVLYAMS +  + +   +K A+VVG+
Sbjct: 13  IEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKSARVVGD 72

Query: 83  VMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFGNIDGDSAAAMRYTECKMTEAAM 142
           V+G +HPHGD+++YD +VR+AQ FS R  LV+GQGNFG+IDGDSAAAMRYTE +M++ A 
Sbjct: 73  VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAH 132

Query: 143 LLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANGSSGIAVGMATSIPPHNAAELID 202
            LL  +D++ VDF P YDG ++ P V+P+  PNLL NGSSGIAVGMAT+IPPHN +E+I+
Sbjct: 133 ELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHNLSEVIN 192

Query: 203 ACQLLLANPDATTADLLEKVPGPDFPTGGVIVESRASLLETYETGRGGVRMRAKWEKE-D 261
            C   + + + +   L+  +PGPDFPT   I+  +  + E Y TGRG V +RA+ E E D
Sbjct: 193 GCLAYIDDENISVEGLMTHIPGPDFPT-AAIINGKRGIEEAYRTGRGKVYIRARAEVEAD 251

Query: 262 TGRGTYQIVVTEIPYQVKKSDLVEQLADLIDSKKAALLGDVRDESAED-IRLVLEPKSKN 320
              G   I+V EIPYQV K+ L+E++A+L+  K+   +  +RDES +D +R+V+E K ++
Sbjct: 252 AKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDGMRIVIEIK-RD 310

Query: 321 VEPEVLMESLFKLSALESRFPVNINVLDARGTPGVMGIKQALMAFLAHRREVLTRRARHR 380
              EV++  L+  + ++  F +N+  L  +G P VM +K+ L AF+ HRREV+TRR    
Sbjct: 311 AVGEVVLNHLYSQTQMQVSFGINMVALH-QGQPKVMTLKEILAAFVRHRREVVTRRTIFE 369

Query: 381 LAKIEARLHILDGLLIAYLNLDEVIRIVRYEDKPKE----------------KLIETFG- 423
           L K   R HIL+GL IA +N+D +I ++R+   P +                 ++E  G 
Sbjct: 370 LRKARDRAHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSVASMLERAGD 429

Query: 424 --------------------LTDIQADAILNTRLRQLAKLEEMEIRREHAELVEERDGIL 463
                               LT+ QA AIL+ RL++L  LE  ++  E+ EL+ +   +L
Sbjct: 430 DAARPEWLEPEFGIHDDRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLGQIAELL 489

Query: 464 AMLASEAKQWKLVGVGLSEVRAALLKIKHPLDKPRPTGVTGRSVFGEAPQVDADAAIEAM 523
            +L S  +  ++       +R  LL I+   +  R T +T  S         AD  IE +
Sbjct: 490 FILRSPERLMEV-------IREELLAIREQYNDVRRTEITHNS---------ADINIEDL 533

Query: 524 IVREPITIILSERGWI------------RAAKGKIDDPSELKFKEGDKLGFLVPAETTDK 571
           I  E + + LS +G++            R  KGK    S  + KE D +  L+ A T D 
Sbjct: 534 ISEENVVVTLSHQGYVKYQPLSDYEAQRRGGKGK----SAARIKEEDFIDRLLVANTHDT 589

Query: 572 LLIFSSDGRFFTLGCDKLPSA-RG-HGEPVRMMIELDDKVKIIDVFP---FKAGRKRILA 626
           +L FSS GR + L   +LP A RG  G P+  ++ L+   +I  + P   ++ G    +A
Sbjct: 590 ILCFSSRGRLYWLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMA 649

Query: 627 SKGGYGFLMPEEEALANRKAG--KQVLNVGNEGAAFCLEAVGDQLAVIGDNGKILIFPLE 684
           +  G        E    R AG     LN G+E     L    +++ +    GK++ F   
Sbjct: 650 TASGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAEGKVVRFSES 709

Query: 685 ELPEMPRG----KGVKLQ 698
            +  M R     +G+ LQ
Sbjct: 710 AVRTMGRTATGVRGINLQ 727