Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 752 a.a., DNA topoisomerase IV, subunit A from Escherichia coli BL21

 Score =  498 bits (1282), Expect = e-145
 Identities = 278/681 (40%), Positives = 408/681 (59%), Gaps = 25/681 (3%)

Query: 23  LTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLYAMSNMRLNPDAAARKCAKVVGE 82
           L E     YL Y++  I  RALP + DGLKPV RR++YAMS + LN  A  +K A+ VG+
Sbjct: 10  LHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGD 69

Query: 83  VMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFGNIDGD-SAAAMRYTECKMTEAA 141
           V+G +HPHGD++ Y+A+V +AQ FS R PLV+GQGN+G  D   S AAMRYTE ++++ +
Sbjct: 70  VLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYS 129

Query: 142 MLLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANGSSGIAVGMATSIPPHNAAELI 201
            LLL  + +   D+ P +DG  +EP +LP+  PN+L NG++GIAVGMAT IPPHN  E+ 
Sbjct: 130 ELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVA 189

Query: 202 DACQLLLANPDATTADLLEKVPGPDFPTGGVIVESRASLLETYETGRGGVRMRAKWEKED 261
            A   L+  P  T   LL+ V GPD+PT   I+ SRA + + YE GRG VRMRA W+KED
Sbjct: 190 QAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKED 249

Query: 262 TGRGTYQIVVTEIPYQVKKSDLVEQLADLIDSKKAALLGDVRDESAED--IRLVLEPKSK 319
                  +V++ +P+QV  + ++EQ+A  + +KK  ++ D+RDES  +   RLV+ P+S 
Sbjct: 250 GA-----VVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSN 304

Query: 320 NVEPEVLMESLFKLSALESRFPVNINVLDARGTPGVMGIKQALMAFLAHRREVLTRRARH 379
            V+ + +M  LF  + LE  + +N+N++   G P V  + + L  +L  RR+ + RR  +
Sbjct: 305 RVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNY 364

Query: 380 RLAKIEARLHILDGLLIAYLNLDEVIRIVRYEDKPKEKLIETFGLTDIQADAILNTRLRQ 439
           RL K+  RLHIL+GLL+A+LN+DEVI I+R ED+PK  L+  FGLT+ QA+AIL  +LR 
Sbjct: 365 RLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRH 424

Query: 440 LAKLEEMEIRREHAELVEERDGILAMLASEAKQWKLVGVGLSEVRAALLKIKHPLDKPRP 499
           LAKLEEM+IR E +EL +ERD +  +LASE K   L+   L     A             
Sbjct: 425 LAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAHAY------------ 472

Query: 500 TGVTGRSVFGEAPQVDADAAIEAMIVREPITIILSERGWIRAAKGKIDDPSELKFKEGDK 559
            G   RS   E  +  A +  + M+  EP+TI+LS+ GW+R+AKG   D   L +K GD 
Sbjct: 473 -GDDRRSPLQEREEAKAMSEHD-MLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDS 530

Query: 560 LGFLVPAETTDKLLIFSSDGRFFTLGCDKLPSARGHGEPVRMMIELDDKVKIIDVFPFKA 619
               V  ++   ++   S GR + +    LPSARG GEP+   + L     +  +     
Sbjct: 531 FKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESD 590

Query: 620 GRKRILASKGGYGFLMPEEEALANRKAGKQVLNVGNEGAAF---CLEAVGDQLAVIGDNG 676
            +K ++AS  GYGF+    + +A  +AGK ++ +           +E   D L  I   G
Sbjct: 591 DQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAG 650

Query: 677 KILIFPLEELPEMPRGKGVKL 697
           ++L+FP+ +LP++ +GKG K+
Sbjct: 651 RMLMFPVSDLPQLSKGKGNKI 671