Pairwise Alignments

Query, 672 a.a., cell elongation specific D,D-transpeptidase from Caulobacter crescentus NA1000

Subject, 632 a.a., penicillin-binding protein 2 from Pseudomonas simiae WCS417

 Score =  337 bits (865), Expect = 8e-97
 Identities = 221/618 (35%), Positives = 335/618 (54%), Gaps = 23/618 (3%)

Query: 12  NERQGVFHRRAFLLGGLTGLGLL-TLGGRLAQLQLVEAQRYQKLSAGNQFNYRLVPPPRG 70
           +E+     R   + G +  + LL  L  RL  LQ+++   +  LS  N+ + + +PP RG
Sbjct: 10  HEKDARLVRSRVVFGAIMVVALLGVLIARLYFLQVIQYDYHSTLSENNRVHVQPIPPTRG 69

Query: 71  LIMDRNGVSLASNRPNFRLMINKEKGLEAEAVLDDLSKLVPIDGTRRARILKELDRAPRK 130
           LI DRNGV +A NRP+F L + +E+  + + +LD + +++ +    RA   K + +  R 
Sbjct: 70  LIFDRNGVVVADNRPSFSLSMTRERSGDWQQILDVIVEVLQLTPEDRAIFEKRMKQGRRP 129

Query: 131 -APVVVMEDLSWEEFSRVNIRAPELPNVTADMGEVRVYPFGGAFAHVIGYVAKVSDRDLK 189
             PV ++ +L+ E+ +R+ +    LP V      VR YP G  FAH +GY+ ++++++LK
Sbjct: 130 FEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYMGRINEKELK 189

Query: 190 AAEGDATQDQELLHHPGFRIGKQGVEKAFDKDLRGRAGATKTEVDSVGRVVRLDPAGDIP 249
             +     +    HH    IGK G+E+ ++ +L G+ G  + E ++ GRV+R+    D  
Sbjct: 190 TLD---PVNYSGTHH----IGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD-- 240

Query: 250 PVAGKAIHLTLDADIQNRALEVMGEESGAIVVMDCRNGDLLCMASAPSFDANRFVRGLSG 309
           PV GK I L+LD  +Q  A   +G   GA+V +D + G++L M S PSFD N FV G+S 
Sbjct: 241 PVPGKDIVLSLDIKLQEAAEMALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISF 300

Query: 310 PEYKALAEYERKPLLDKSMTGLFPPGSTFKPTVGLAALAAG-IDPEVRVNCPGSWYYGG- 367
             Y  L +   +PL ++ + GL+PPGST KP V +A L AG +    RV  PG +     
Sbjct: 301 KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASSRVFDPGYYMLPNY 360

Query: 368 -RVWRCWEKGGHGPQNMHDAIKNSCDVYFYQISLKIGPDAIARAARAVGFGQTFDIGIPG 426
              +R W + G G  ++  AI  S D YFY ++ K+G D ++      G GQ   + +  
Sbjct: 361 DHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFGLGQKVSLDMFE 420

Query: 427 QKKGIVPDREWKKRAFKRNPANQIWFPGETPSYAIGQGALTVNALQLAVMTARLANAKKA 486
           +  G++P REW KRA +R    Q WFPGET    IGQG +    LQLA  TA +AN    
Sbjct: 421 ESPGLMPSREW-KRATRR----QAWFPGETLILGIGQGYMQATPLQLAQATALVANKGIW 475

Query: 487 LVPRLIKSIGDMERPAGSDVPDLPF-SPEHLAYVRNGMAAVANDVRGTAYRNSQLGLGDV 545
             P L K+I   +    + +PD+          V +GM  V +  RGTA R + +G    
Sbjct: 476 NRPHLAKTIEGEKPVDDNPIPDIVLRDASDWTKVNHGMQQVMHGARGTA-RKAAVG-AQY 533

Query: 546 QMAGKTGTAQVRSYDKGVSRDSKDVRWRLKDHNLFVAFAPYDDPRYAVSVIIEHGGLGGA 605
           ++AGK+GTAQV +  +G   D   V+ R +DH LFV FAP DDP+  V+V++E+G  G  
Sbjct: 534 RIAGKSGTAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADDPKIVVAVMVENGESGSG 593

Query: 606 TAGAPRAREVMRVALLKD 623
            A AP  R+VM   LL D
Sbjct: 594 VA-APVVRQVMDAWLLAD 610