Pairwise Alignments

Query, 672 a.a., cell elongation specific D,D-transpeptidase from Caulobacter crescentus NA1000

Subject, 642 a.a., penicillin-binding protein 2 from Kangiella aquimarina DSM 16071

 Score =  305 bits (782), Expect = 3e-87
 Identities = 204/628 (32%), Positives = 336/628 (53%), Gaps = 34/628 (5%)

Query: 10  EVNERQGVFHRRAFLLGGLTGLGLLTLGGRLAQLQLVEAQRYQKLSAGNQFNYRLVPPPR 69
           +V     +F  R  +   +  + ++ L  R  +LQ+++ Q+YQ  S  N+ + + V P R
Sbjct: 9   DVGRETSMFFARCIVALFIVFILMVVLISRQFKLQVLDYQKYQTQSENNRISIQSVAPVR 68

Query: 70  GLIMDRNGVSLASNRPNFRLMINKEKGLEAEAVLDDLSKLVPIDGTRRARILKELDRAPR 129
           GLI DR+G  LA NR  F L I  E+  +   ++ +L  ++ I   +  + L+++   P+
Sbjct: 69  GLIYDRDGKLLAQNRSIFTLEITPEQTRDLPKLVQELRNVLTISDEQVLKFLEQIKFRPK 128

Query: 130 KAPVVVMEDLSWEEFSRVNIRAPELPNVTADMGEVRVYPFGGAFAHVIGYVAKVSDRDLK 189
               V+  +L+ EE ++ ++     P  + +    R YP+ G   HV+G +  ++  +L+
Sbjct: 129 FNSYVLKSNLTEEEVAKFSVVQHMYPGASLEARLERYYPYKGDLVHVLGRMGAINVEELE 188

Query: 190 AAEGDATQDQELLHHPGFRIGKQGVEKAFDKDLRGRAGATKTEVDSVGRVVRLDPAGDIP 249
           A +    ++  L +    +IGK G+E+ ++  L G  G+ + E D  GR++R+    +  
Sbjct: 189 AMD----EETRLRYAATSKIGKLGLERYYESILHGEVGSQRVETDVRGRIIRVLERDE-- 242

Query: 250 PVAGKAIHLTLDADIQNRALEVMGE--ESGAIVVMDCRNGDLLCMASAPSFDANRFVRGL 307
           PVAG  IHL LD  +Q +A E+M E    GAIV ++   G +L M S P +D N F  G+
Sbjct: 243 PVAGMDIHLHLDLGLQRKATELMKEVGARGAIVAIEPATGGVLAMVSQPGYDPNLFTGGI 302

Query: 308 SGPEYKALAEYERKPLLDKSMTGLFPPGSTFKPTVGLAALAAG-IDPEVRVNCPGSWY-- 364
           SG EY+ L   ER PL ++++ G + P ST KP +    L  G I PE ++  PG W+  
Sbjct: 303 SGEEYRKLLTPER-PLYNRAVQGTYSPASTIKPHLAWLGLKEGVITPETKIRDPG-WFSL 360

Query: 365 -YGGRVWRCWEKGGHGP-QNMHDAIKNSCDVYFYQISLKIGPDAIARAARAVGFGQTFDI 422
               R +R W++ GH P  ++ D+I  SCD +FY ++++IG D I       GFGQ   I
Sbjct: 361 PNNDRRYRDWKRWGHAPYMDVVDSIIESCDTFFYDLAVRIGIDRIHEGMLQFGFGQKTGI 420

Query: 423 GIPGQKKGIVPDREWKKRAFKRNPANQIWFPGETPSYAIGQGALTVNALQLAVMTARLAN 482
            +  +K GI+P REWK+ A K     + W+ G+T +  IGQG  TV  LQLA  TA +AN
Sbjct: 421 DMEEEKIGILPSREWKRTARK-----EPWYNGDTVNIGIGQGYWTVTPLQLANATAVIAN 475

Query: 483 AKKALVPRLIKSI--GDMERPAGSDVPDLPF------SPEHLAYVRNGMAAVANDVRGTA 534
                  +L++    G++      +VP + +          L  V+  M  V    +GTA
Sbjct: 476 DGIRYQLQLVRKFVEGNIHE---QNVPVMAYHQIEIGDGRWLDLVKESMRDVVTGAKGTA 532

Query: 535 YRNSQLGLGDVQMAGKTGTAQVRSYDKGVSRDSKDVRWRLKDHNLFVAFAPYDDPRYAVS 594
            R +  G  +   AGKTGTAQV+S  +    D++ +  +  D+ LF+ +APY++P+ A++
Sbjct: 533 -RTAFQG-AEYIAAGKTGTAQVKSLGEEEEYDAETLAEKFHDNALFIGYAPYENPKIAIA 590

Query: 595 VIIEHGGLGGATAGAPRAREVMRVALLK 622
           V++E+ G GG+ A AP AR++M   L++
Sbjct: 591 VVMENAGGGGSNA-APIARKLMDYYLIE 617