Pairwise Alignments

Query, 672 a.a., cell elongation specific D,D-transpeptidase from Caulobacter crescentus NA1000

Subject, 636 a.a., peptidoglycan DD-transpeptidase MrdA from Dickeya dianthicola ME23

 Score =  304 bits (779), Expect = 7e-87
 Identities = 204/644 (31%), Positives = 323/644 (50%), Gaps = 37/644 (5%)

Query: 8   FFEVNERQGVFHRRAFLLGGLTGLGLLTLGG----RLAQLQLVEAQRYQKLSAGNQFNYR 63
           F +      +F RRA +      LG+L L G     L  LQ++    Y+  S  N+    
Sbjct: 8   FRDYTAEAALFVRRALV----AFLGILLLSGILVANLYHLQVLRFDDYRTRSNENRIKLV 63

Query: 64  LVPPPRGLIMDRNGVSLASNRPNFRLMINKEKGLEAEAVLDDLSKLVPIDGTRRARILKE 123
            + P RG+I DRNG  LA NR  ++L +  EK    E  L  L  ++ +         KE
Sbjct: 64  PIAPSRGIIYDRNGTPLALNRTIYQLELIPEKVNNLEETLQALKSIIDLTDEDIDNFRKE 123

Query: 124 LDRAPRKAPVVVMEDLSWEEFSRVNIRAPELPNVTADMGEVRVYPFGGAFAHVIGYVAKV 183
             R+ R   + V   L+  + +   +     P V     + R YP+G A  HVIGYV+K+
Sbjct: 124 RKRSRRFTSIPVKTGLNEVQVASFAVNQYRFPGVEVKGYQRRYYPYGAALTHVIGYVSKI 183

Query: 184 SDRDLKAAEGDATQDQELLHHPGFR-IGKQGVEKAFDKDLRGRAGATKTEVDSVGRVVRL 242
           +D+DL+  +    Q+ EL  +     IGK G+E+ ++  L G+ G  + EV++ GRV+R 
Sbjct: 184 NDKDLERLD----QEGELADYAATHDIGKLGIERYYEDVLHGKPGYEEVEVNNRGRVIR- 238

Query: 243 DPAGDIPPVAGKAIHLTLDADIQNRALEVMGEESGAIVVMDCRNGDLLCMASAPSFDANR 302
               + PP AGK I LTLD ++Q    +++     A+VV D ++  +L M S PS+D N 
Sbjct: 239 -QLHEQPPQAGKDITLTLDLNLQLYIEKLLAGSRAAVVVTDPKDASILAMVSTPSYDPNL 297

Query: 303 FVRGLSGPEYKALAEYERKPLLDKSMTGLFPPGSTFKPTVGLAALAAG-IDPEVRVNCPG 361
           FV G+S   Y AL     +PL++++  G++PP ST KP + ++AL+AG I P   +  PG
Sbjct: 298 FVDGISSKTYHALLNDPNRPLINRATQGVYPPASTVKPYIAVSALSAGVITPYTSLFDPG 357

Query: 362 SWYYGG--RVWRCWEKGGHGPQNMHDAIKNSCDVYFYQISLKIGPDAIARAARAVGFGQT 419
            W   G  + +R W+K GHG  N+  +++ S D +FYQ+S  +G D ++      G+G  
Sbjct: 358 WWQLPGSEKRFRDWKKWGHGRLNLTKSLEESADTFFYQVSYDMGIDRLSEWMSKFGYGHR 417

Query: 420 --FDIGIPGQKKGIVPDREWKKRAFKRNPANQIWFPGETPSYAIGQGALTVNALQLAVMT 477
              D+    +  GI+P REWK + +K+      W+ G+T    IGQG  T   +Q+    
Sbjct: 418 TGIDLSDKEESPGIMPTREWKMKRYKKP-----WYQGDTIPVGIGQGYWTATPIQMLKAL 472

Query: 478 ARLANAKKALVPRLIKSIGD------MERPAGSDVPDLPFSPEHLAYVRNGMAAVANDVR 531
             L N  +   P L+ S  +        +     + D+     +   V++GM  VAN   
Sbjct: 473 TTLINDGQVKAPHLLSSTQENNTQVPYRQSEHQQIGDI--RSGYWEIVKDGMYGVANRQN 530

Query: 532 GTAYRNSQLGLGDVQMAGKTGTAQVRSYDKGVSRDSKDVRWRLKDHNLFVAFAPYDDPRY 591
           GTA++         ++A K+GTAQV    +  + ++  +  RL+DH L VAFAPY +P+ 
Sbjct: 531 GTAHK--FFADSSYKIAAKSGTAQVFGLKENETYNANRIAERLRDHKLMVAFAPYSNPKV 588

Query: 592 AVSVIIEHGGLGGATAGAPRAREVMRVALLKDPEIRARIERPAP 635
           A+S+I+E+GG G A       R+++   +L D         P+P
Sbjct: 589 AMSIILENGGAGPAVGTI--VRQILDHIMLGDNNTSLPDAPPSP 630