Pairwise Alignments

Query, 502 a.a., cell wall degradation protein from Caulobacter crescentus NA1000

Subject, 531 a.a., peptidoglycan-binding protein from Pseudomonas simiae WCS417

 Score =  206 bits (524), Expect = 2e-57
 Identities = 166/511 (32%), Positives = 241/511 (47%), Gaps = 61/511 (11%)

Query: 35  ARPVQSGPIVAPRPAVIPPDLSAVQLSVEQV-----EVLRAVLGDA-------YSHGFAM 82
           A PV+  P+  P P     DL+ VQ ++ Q+     ++ R V   A       Y     M
Sbjct: 24  ALPVEPLPVTTPAPV----DLAPVQQALAQLPSVCPDLARQVDAAAQLRLQAFYQQQGNM 79

Query: 83  TAFSPD---RAIE---LYMAGD---------PASRAAGQAQLVSLTLA--YARAVRT--- 122
             +S D   +A++   L +A D         P   AA       +T +  Y +A++    
Sbjct: 80  PLWSADDRRQALQSQLLMLADDGLDPTHYSLPVPDAAANVLCSDITSSQHYLQALQDLHY 139

Query: 123 GRLPISAFKAEWGLRPAAYDPTPEFVAAVQQGR--LAEWLETLPPPYTGYQALRTGLATY 180
           GRL  S F+  W  +P   DP  E +A   QG   +A+  +   P    Y++LR   +T 
Sbjct: 140 GRLQQSRFEPLWHAQPPTRDPNVEVLAFAAQGLQDMAQAFDQARPSADLYRSLRNAYSTV 199

Query: 181 RDIAAKGGWLPIAAGPELKEGVTGARVVALEARLAAEDPTVAVDAAPVFDAALTQAVQRA 240
           R       W P+A+GP L+ G+   RV  L  RL +        +   +   L +AV+  
Sbjct: 200 RQQPLPH-WDPVASGPLLRPGMEDPRVPELARRLISGGYLANAPSGKQYRDELVKAVKAF 258

Query: 241 QKRFGLNPNGIVDRATLAALNIPVERRIDQIVANMERWRWLPQTLPAERIQVNVAAAILS 300
           Q    L  +G++   T+A LNI    R +Q+  N+ER+RWL Q L  E + VNVAAA LS
Sbjct: 259 QLSHSLQADGVIGAGTVAELNISPAVRREQLRINLERFRWLAQDLEPEGVLVNVAAAQLS 318

Query: 301 VFHHDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIASKEIWPKERASPGYL 360
           V+    P    R   GR   +TP+L S I  + LNP W +P +I  ++  P  R +P YL
Sbjct: 319 VYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPPTIMREDKLPAIRLNPEYL 378

Query: 361 ARNDFIVIPIEG-------------GGTRLQQKAGPLAALGKVKFDFNNPYGVYLHDTPS 407
            + +  V+  EG             G   L+Q+AGP   LGK+   F NPY VYLHDTPS
Sbjct: 379 RQQNLQVLDAEGHPLTAEQVDWARPGNILLRQEAGPRNPLGKIVMRFPNPYSVYLHDTPS 438

Query: 408 RSRFDSFSRLASHGCVRLQKPIELVNEVMRDDPTWTPE--KVNETLASGETVRAKLPQQI 465
           +  F    R  S GCVR+++P+     ++RD      E  + +E LA+G T   +L   +
Sbjct: 439 QPLFTKGPRAFSSGCVRVEQPL-----LLRDLLVSPAERARTDELLATGLTHEFRLATPV 493

Query: 466 AVYLLYWTAYVTPDGQVNFRQDPYGWDRDLV 496
            V L YWT  V  +G + +  D YG  RDLV
Sbjct: 494 PVLLSYWTVEVNREGGLVYAPDIYG--RDLV 522