Pairwise Alignments

Query, 502 a.a., cell wall degradation protein from Caulobacter crescentus NA1000

Subject, 520 a.a., L,D-transpeptidase family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  258 bits (660), Expect = 3e-73
 Identities = 164/445 (36%), Positives = 229/445 (51%), Gaps = 22/445 (4%)

Query: 61  SVEQVEVLRAVLGDAYSHGFAMTAFSPDRAIELYMAGDPASRAAGQAQLVSLTLAYARAV 120
           + ++V  L  V   A  HG A      D    + +A DPAS      +  +  LAYAR +
Sbjct: 70  NADRVRALNTVAAGANRHGLA----GSDYFDFVGLAADPAS---ADLRTTAAALAYARVL 122

Query: 121 RTGRLPISAFKAEWGLRPAAYDPTPEFVAAVQQGRLAEWLETLPPPYTGYQALRTGLATY 180
             G++     +  W ++    D       A+ +  L +W + L P   GYQ L  G   Y
Sbjct: 123 AEGKVRPETVEDLWEMQKNRVDLPRGLSDALTRNVLGQWYDGLAPTDIGYQNLSAGYVRY 182

Query: 181 RDIAAKGGWLPIAAGPELKEGVTGARVVALEARLAAEDPTVAVDAAP------VFDAALT 234
           R +AA+GGW     G  ++ G +  R+ AL  RL AE    A D A       V++A L 
Sbjct: 183 RRLAAQGGWPRFTQGATIEPGNSDRRIPALIDRLTAEGDLSAADGARLKSQGLVYNAELQ 242

Query: 235 QAVQRAQKRFGLNPNGIVDRATLAALNIPVERRIDQIVANMERWRWLPQTLPAERIQVNV 294
           +AVQ  Q R GL  +G +   T  +L    E R  QI  N+ER RWL + +  ERI+VN 
Sbjct: 243 RAVQSFQNRHGLGADGRIGAGTQRSLGASAEDRARQIALNLERRRWLKREVAPERIEVNT 302

Query: 295 AAAILSVFHHDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIASKEIWPKER 354
           AAAI+  +    P  + R V G   ++TP L     S+V NPPW VP  IA +EI PK  
Sbjct: 303 AAAIMVYWKDGKPVHSNRVVVGSAENQTPSLEKPFASVVANPPWYVPAGIARREILPK-- 360

Query: 355 ASPGYLARNDFIVIPIEGGGTRLQQKAGPLAALGKVKFDFNNPYGVYLHDTPSRSRFDSF 414
             PGYLA ND  V      GT + Q+AGP +ALG VKF+  + Y ++LHDTPS++ F+  
Sbjct: 361 -GPGYLAANDMYV----KDGTVI-QRAGPRSALGYVKFELRDSYAIFLHDTPSKAAFNLS 414

Query: 415 SRLASHGCVRLQKPIELVNEVMRDDPTWTPEKVNETLASGETVRAKLPQQIAVYLLYWTA 474
           +R  SHGCVR+Q  +E    ++  DP    +  +    + ET R    ++I+V LLYWTA
Sbjct: 415 TRQRSHGCVRVQNAVEFARLLLSPDPAKLAQ-FDTAQDTRETTRVTTGREISVRLLYWTA 473

Query: 475 YVTPDGQVNFRQDPYGWDRDLVQRI 499
           +V   G+V FR+D YG D  L Q +
Sbjct: 474 FVDGQGRVAFREDVYGRDDKLAQAL 498