Pairwise Alignments

Query, 502 a.a., cell wall degradation protein from Caulobacter crescentus NA1000

Subject, 615 a.a., murein L,D-transpeptidase from Escherichia coli BL21

 Score =  179 bits (455), Expect = 2e-49
 Identities = 143/464 (30%), Positives = 216/464 (46%), Gaps = 60/464 (12%)

Query: 71  VLGDAYSHGFAMTAFSPDRAIELYMAGDPASRAAGQAQLVSLTLAYARAVRTGRLPISAF 130
           VL DA        A  P +      +  P + A     +++    +  A+  G+LP   F
Sbjct: 152 VLSDAMMGYLHFIANIPVKGTRWLYSSKPYALATPPLSVIN---QWQLALDKGQLP--TF 206

Query: 131 KAEWGLRPAAYDPTPEFVAAVQQGRLAEWLETLP-PPYTGYQALRTG-----LATYRDIA 184
            A  GL P      P++ AA+ +  LA   +T P P  TG   LR G     +   R+I 
Sbjct: 207 VA--GLAPQH----PQY-AAMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPALREIL 259

Query: 185 AKGGWLPIAAGPELK--------EGVTGARVVALEAR---------LAAEDPTVAVDAAP 227
            + G L    GP++         + V     V +E            +   P  AV AA 
Sbjct: 260 QRTGMLD--GGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAA- 316

Query: 228 VFDAALTQAVQRAQKRFGLNPNGIVDRATLAALNIPVERRIDQIVANMERWRWLPQTLPA 287
            +D  L +AV+R Q   GL  +G +  AT   LN+   +R   +  N++R R LP  L +
Sbjct: 317 -YDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL-S 374

Query: 288 ERIQVNVAAAILSVFHHDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIASK 347
             I VN+ A  L  + +    L  R + GRP  +TPM+SS ++++V+NPPWNVP ++A K
Sbjct: 375 TGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARK 434

Query: 348 EIWPKERASPGYLARN-------------------DFIVIPIEGGGTRLQQKAGPLAALG 388
           +I PK R  PGYL  +                   D+  I       R QQ  GP  +LG
Sbjct: 435 DILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLG 494

Query: 389 KVKFDFNNPYGVYLHDTPSRSRFDSFSRLASHGCVRLQKPIELVNEVMRDDPTWTPEKVN 448
           + KF+  +   +YLHDTP+ + F   +R  S GCVR+ K  +L N +++ D  W  ++++
Sbjct: 495 RYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQ-DAGWNDKRIS 553

Query: 449 ETLASGETVRAKLPQQIAVYLLYWTAYVTPDGQVNFRQDPYGWD 492
           + L  G+T    + Q I V L Y TA+V  DG+  +R D Y +D
Sbjct: 554 DALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597