Pairwise Alignments

Query, 240 a.a., Helix-turn-helix DNA-binding protein from Caulobacter crescentus NA1000

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 104 EAGRAALAVAATGREAPLARLSATSFDRSGDTPASWLL---EARTRLVGAPAEP--IASV 158
           EA  +AL      R+A LA +           P    L    AR  L    A+P  + ++
Sbjct: 136 EASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEAL 195

Query: 159 SRGLGRHPVAFARAFRSAYGRSPARYRHDWRVAGAIERIVRSAAALADIAADTGFADQAH 218
           +  +   P  FAR FR A G  P  +    R+A A E +    AA + +A D GFADQ+H
Sbjct: 196 AAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAA-SQVAFDLGFADQSH 254

Query: 219 MTRAVRRASGWSPGALRR 236
           ++R  ++A G +PGA R+
Sbjct: 255 LSRQFKQAYGVTPGAYRQ 272