Pairwise Alignments

Query, 357 a.a., LacI-family transcriptional regulator from Caulobacter crescentus NA1000

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  170 bits (431), Expect = 4e-47
 Identities = 110/336 (32%), Positives = 184/336 (54%), Gaps = 8/336 (2%)

Query: 25  ATINDIARLAGVSKKTVSRVINQSPFVRDETRERIEAVIAEWGYAPDPQARGLAFRRSFL 84
           ATI D+A LAG+S  TVS V+N++  V ++ R ++EA I E  Y P   AR L  R +  
Sbjct: 2   ATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTAT 61

Query: 85  IGMIYDNPNPQYVVNMQLGLLDGMRGSGFELVVHPCNRASPTFLTDIRAFVERQKLFGVV 144
           IG++  N    Y   +  G+ D    +G+ +++   +       + +R  +E+ ++ G+V
Sbjct: 62  IGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEK-RIDGLV 120

Query: 145 LPPSVSEDERVAKLLNEIGCAYIRIASVELDKPEHMIVGQDRMGGAQ-AARHIVELGHKR 203
           +  SV +D+ + + L  +    + I   EL+  +  +V  D   GA  A RH++ELGH+ 
Sbjct: 121 VA-SVGQDDDLLQSLASVRTPMV-IVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRD 178

Query: 204 IAFISGPETFRSSHERRGGFEDGLAEAGLSLSPNDIVQGAYTFESGVACGDELLSRSPRP 263
           +A+I GP     +  R  GF   +AEAG  +  + ++   +T   G A   ++L    RP
Sbjct: 179 VAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKRP 237

Query: 264 TAIFCGNDEMAAGVLQSARKAGLSVPQDLTVVGFDDFQIAQAVWPPLTTIHTPTREIGRI 323
           +AIF GND +  GVL++A +  +SVP +L+V+GFDD ++++ V+P LTT+    RE+G  
Sbjct: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297

Query: 324 AVEKL---IGDERREPRDVTKMEPNLVIRQSSGPVP 356
           A   L   I   R+   +   + P +V+R+S+GP P
Sbjct: 298 AASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPRP 333