Pairwise Alignments

Query, 357 a.a., LacI-family transcriptional regulator from Caulobacter crescentus NA1000

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  154 bits (388), Expect = 4e-42
 Identities = 97/310 (31%), Positives = 153/310 (49%), Gaps = 13/310 (4%)

Query: 27  INDIARLAGVSKKTVSRVINQSPFVRDETRERIEAVIAEWGYAPDPQARGLAFRRSFLIG 86
           + D+ARLAGVS  TVS VIN+  FV +   E++EA I    YAP   AR L   ++  IG
Sbjct: 1   MKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 87  MIYDNPNPQYVVNMQLGLLDGMRGSGFELVVHPCNRASPTFLTDIRAFVERQKLFGVVLP 146
           M+       +   +  G+       G+ LV+            ++   ++++    ++L 
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 147 PSVSEDERVAKLLNEIGCAYIRIASVELD-------KPEHMIVGQDRMGGAQAARHIVEL 199
               +  R      EI   Y  I +V +D           +I     +GG  A +++++ 
Sbjct: 121 TETHQPSR------EIMERYPSIPTVMMDWSPFDGEGDSDLIQDNSLLGGDLATQYLIDK 174

Query: 200 GHKRIAFISGPETFRSSHERRGGFEDGLAEAGLSLSPNDIVQGAYTFESGVACGDELLSR 259
           G  RIA I+GP     +  R  G+   +  AGL++     + G + F  G      LL+ 
Sbjct: 175 GFTRIACITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAH 234

Query: 260 SPRPTAIFCGNDEMAAGVLQSARKAGLSVPQDLTVVGFDDFQIAQAVWPPLTTIHTPTRE 319
             RP A+F GND MA G  Q+  +AGL +PQD+ V+G+DD ++A+ + PPLTTIH P  E
Sbjct: 235 QQRPQAVFTGNDAMAVGAYQALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDE 294

Query: 320 IGRIAVEKLI 329
           +G +A++ LI
Sbjct: 295 LGELAIDVLI 304