Pairwise Alignments

Query, 357 a.a., LacI-family transcriptional regulator from Caulobacter crescentus NA1000

Subject, 330 a.a., transcriptional repressor of ribose metabolism from Escherichia coli BL21

 Score =  160 bits (404), Expect = 6e-44
 Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 11/310 (3%)

Query: 25  ATINDIARLAGVSKKTVSRVINQSPFVRDETRERIEAVIAEWGYAPDPQARGLAFRRSFL 84
           AT+ D+ARLAGVS  TVS VIN+  FV +    ++EA I E  YAP   AR L   ++  
Sbjct: 2   ATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHT 61

Query: 85  IGMIYDNPNPQYVVNMQLGLLDGMRGSGFELVVHPCNRASPTFLTDIRAFVERQKLFGVV 144
           IGM+       +   +  G+       G  LV+            ++   ++++    ++
Sbjct: 62  IGMLITASTNPFYSELVRGVERSCFERGDSLVLCNTEGDEQRMNRNLETLMQKRVDGLLL 121

Query: 145 LPPSVSEDERVAKLLNEIGCAYIRIASVELD-----KPEHMIVGQDRMGGAQAARHIVEL 199
           L     +  R      EI   Y  + +V +D         +I     +GG  A +++++ 
Sbjct: 122 LCTETHQPSR------EIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDK 175

Query: 200 GHKRIAFISGPETFRSSHERRGGFEDGLAEAGLSLSPNDIVQGAYTFESGVACGDELLSR 259
           GH RIA I+GP     +  R  G+   +  AGL++     V G + F  G     +LLS 
Sbjct: 176 GHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSH 235

Query: 260 SPRPTAIFCGNDEMAAGVLQSARKAGLSVPQDLTVVGFDDFQIAQAVWPPLTTIHTPTRE 319
             RP A+F GND MA GV Q+  +A L VPQD+ V+G+DD ++A  + PPLTTIH P  E
Sbjct: 236 PLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDE 295

Query: 320 IGRIAVEKLI 329
           +G +A++ LI
Sbjct: 296 LGELAIDVLI 305