Pairwise Alignments

Query, 446 a.a., chaperone protein dnaK from Caulobacter crescentus NA1000

Subject, 450 a.a., putative heat shock protein (VIMSS) from Escherichia coli BW25113

 Score =  140 bits (354), Expect = 6e-38
 Identities = 114/392 (29%), Positives = 185/392 (47%), Gaps = 29/392 (7%)

Query: 51  RSALSFHSVQGVGEAANERVVEAGPWAIEAYLEDPLETRFIQSFKTFAASAAFTETRILN 110
           R A+ ++  + +   A    V+ G  ++  Y++DP E  F++S K+F  ++     ++  
Sbjct: 68  RRAIRYNREEDIDVTAKS--VQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVA- 124

Query: 111 KRYQFEDLLAAFLLRLRDHAGAQLSELPPRIIVGRPVTFAGSSPDEALALTR--YEAAFE 168
               FEDL+ A +L +R  A AQL E   + ++GRP+ F G   DEA    +   E A +
Sbjct: 125 ---LFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAK 181

Query: 169 RLGFTDIRYAYEPVGAAFFFARQLKQDATVLVADFGGGTSDFSLVRFERAADGTL--RST 226
           R GF D+ + YEPV A   +   L+++  VLV D GGGT+D SL+         L   ++
Sbjct: 182 RAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREAS 241

Query: 227 PLSRSGVGVAGDAFDYRIIDQLVSPELGKGSDYRSFSNSLPIPQRYYAAFARWDQLAL-- 284
            L  SG  + G+  D  +  + + P LG G +      +LPI          W+ +A+  
Sbjct: 242 LLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK-GIALPI-------LPWWNAVAIND 293

Query: 285 ------LRASKDMRDIRALERTAVEPDKIAALIEVLDGNHGYALYRSVSALKEALSSQDQ 338
                   +S + R +  L R A EP+K+A L +V      Y L RS    K ALSS  +
Sbjct: 294 VPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAE 353

Query: 339 ATFRFEAGSVRIEKPVARVEFEAWIAPELAAIETAVGQALDQADLTEAGVDRVFLTGGSS 398
                   S  +   +++   E+ ++  L  I   V  ALD A   +   D ++LTGGS+
Sbjct: 354 TRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNA---QEKPDVIYLTGGSA 410

Query: 399 FVPAVREIFLRRFGADKIETGGEFESIASGLA 430
             P +++    +     I  G +F S+ +GLA
Sbjct: 411 RSPLIKKALAEQLPGIPIAGGDDFGSVTAGLA 442