Pairwise Alignments

Query, 488 a.a., 3-hydroxy-3-methylglutaryl CoA synthase from Caulobacter crescentus NA1000

Subject, 493 a.a., Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase from Variovorax sp. SCN45

 Score =  380 bits (975), Expect = e-110
 Identities = 209/485 (43%), Positives = 279/485 (57%), Gaps = 15/485 (3%)

Query: 3   GIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDALG 62
           G+ A   Y PRLRL R  V   + W+AP LK   KG R+MANWDED++TMA+EAAR    
Sbjct: 9   GLLATTRYVPRLRLERGDVLAQHRWMAPGLKTLAKGRRAMANWDEDSVTMAIEAARQLRA 68

Query: 63  PDDDRSHIASLYFASTTAPFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQAL- 121
              D + +A L  ASTT PFA+RLNAGIV++AL +       D   S R  LT L  AL 
Sbjct: 69  ASPDAA-VAELTLASTTLPFAERLNAGIVASALGVAPDAVLRDTASSPRAALTELSAALR 127

Query: 122 --AAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGPGAAEFLGRGSVTDDFVDHF 179
             A     ++   ERR AR  S QE+ FGDGAA  ++ +G   A  +   S   D VDHF
Sbjct: 128 RPANTAAQMLLASERRIARPASTQEMIFGDGAAGALVGNGSPIATLVASASTHADLVDHF 187

Query: 180 RGDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATVA 239
           R      +Y WEERW+RDEG +K+    +R+ L+  G+SA D+  F  P+  + +   VA
Sbjct: 188 RQAGEDHEYGWEERWVRDEGYMKIAVATLRQCLKDGGVSAGDIGQFAMPAPLARINDAVA 247

Query: 240 KSVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRAT 299
           K +GI P A+       +G+ GCA    ML  AL  A  G ++LVA FG G +AL+ R T
Sbjct: 248 KKLGIAPAALVSAEHDSVGDLGCAQPLAMLDIALRAAVPGALVLVAAFGSGCDALLLRRT 307

Query: 300 G---EGTRPARGVTGSLADREVETNYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNED 356
                G  P  G          ET+Y+K+L+F   +D   GMRAE DNKTALT  +R+  
Sbjct: 308 AVPCPGPVPDEG--------HPETSYMKYLSFTRQIDLAWGMRAEMDNKTALTAAWRDHA 359

Query: 357 MILGLVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERRASILSYSADYLTFSMA 416
                  GRC   G +QFPR R+ V P   A DTQ P   A+  A ++S++ D+L ++  
Sbjct: 360 RASRFEAGRCSACGTVQFPRARLCVNPECRAQDTQAPTYLADTPARVMSHTTDFLGYTPD 419

Query: 417 PPNHYGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDR 476
           PP  +G + FEGGGR++M+ TD   G++E GLP+RMV+R+KE D +RGF RYFWKATP R
Sbjct: 420 PPFQFGHIDFEGGGRVLMEFTDTDVGELEVGLPLRMVYRVKEFDHQRGFRRYFWKATPVR 479

Query: 477 AAIAA 481
              ++
Sbjct: 480 TTASS 484