Pairwise Alignments

Query, 488 a.a., 3-hydroxy-3-methylglutaryl CoA synthase from Caulobacter crescentus NA1000

Subject, 492 a.a., Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  507 bits (1306), Expect = e-148
 Identities = 273/492 (55%), Positives = 336/492 (68%), Gaps = 9/492 (1%)

Query: 3   GIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDALG 62
           GI  +G+Y PRLRLSR+AV +ANAW AP    + KG RSM NWDED++TMAV AARD LG
Sbjct: 4   GITGYGSYIPRLRLSRQAVAQANAWYAPQFAGR-KGTRSMTNWDEDSITMAVAAARDCLG 62

Query: 63  PDDDRSHIASLYFASTTAPFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQAL- 121
             DDR HI S+   S+T PFA+RLNAG+V  ALTL + + A D+ GS    L+AL  AL 
Sbjct: 63  AGDDRGHIDSVQLVSSTLPFAERLNAGVVCEALTLNEGVEALDMGGSPSAALSALTAALD 122

Query: 122 ---AAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGPGAAEFLGRGSVTDDFVDH 178
              A GG ALV   + RK RA S+QELD+GDGAAA  I      AE LG  ++T DFVDH
Sbjct: 123 RVNARGGHALVIASDHRKTRAASSQELDYGDGAAAITIGRENVIAEVLGGAALTVDFVDH 182

Query: 179 FRGDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATV 238
           FR      DY+WEERW+RDEGI KL P AI  AL+ +G+ A+ VDHF FP+TF+ M A +
Sbjct: 183 FRMAGEDIDYHWEERWVRDEGIGKLGPRAIAGALQKAGVDAAAVDHFIFPTTFAKMDAQL 242

Query: 239 AKSVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRA 298
           AK+ GI+ EAV D+LAA +GE G  H  +MLA  LE+A+ G+ IL+AQFG GA+A+V R 
Sbjct: 243 AKACGIRAEAVADSLAATVGETGTPHALLMLAAVLERAQPGQHILLAQFGAGAQAVVLRV 302

Query: 299 TGE--GTRPARGVTGSLADREVETNYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNED 356
           T      RPARGV+G LA    E NY KFL+F   +  E+GMR E+D KTAL+T YR+  
Sbjct: 303 TPAIAAFRPARGVSGWLARGVEEKNYTKFLSFREQLRLERGMRGEQDRKTALSTAYRHRA 362

Query: 357 MILGLVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERRASILSYSADYLTFSMA 416
            ILGLV GRC  TG + FP +RIS     P  DTQ+P+K AERR  +LS+SA+ L+F  A
Sbjct: 363 AILGLVAGRCELTGSVHFPPSRISYDQGKPLQDTQKPHKLAERRGQVLSWSAESLSFHRA 422

Query: 417 PPNHYGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDR 476
           PP+ YG V FEGGGRI+M+ TDV+ GDV +G  V M FRIK++DE RGF RYFWKATP  
Sbjct: 423 PPHQYGQVDFEGGGRILMEFTDVAKGDVASGTEVEMSFRIKDIDELRGFTRYFWKATP-- 480

Query: 477 AAIAAQTAQAAE 488
            A AA T  + E
Sbjct: 481 VASAADTTASKE 492