Pairwise Alignments

Query, 483 a.a., deoxyribodipyrimidine photolyase from Caulobacter crescentus NA1000

Subject, 473 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  265 bits (678), Expect = 2e-75
 Identities = 176/481 (36%), Positives = 249/481 (51%), Gaps = 37/481 (7%)

Query: 18  IVWFRKDLRIADNPALRHAAQSGRP-VIPLYILDETPG---IRPMGGASLWWLDKSLKSL 73
           +VWFR+DLR+ DN AL  A +     V+ LYI   TP       M      ++   L +L
Sbjct: 5   LVWFRRDLRLQDNLALAAACRDASARVLALYI--STPAQWQAHDMAPRQAAFISAQLNAL 62

Query: 74  AASLETLGTKLVLRK----GVAAEVLDQLIAQSGARSVVWNRLYDKPSTDRDAAIKAALR 129
             +L   G  L+  +      + E +  +  Q     + +N  Y+     RDAA++  L 
Sbjct: 63  QTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKTLP 122

Query: 130 DRGVDCQSFNAGLLNEPWTVKNGSDQPYKVFTPYWRAAREHLTDVAVTAAPGHLVAPARF 189
              V C+ F+  ++  P  V  G+ + YKVFTP+  A  + L +      P    AP + 
Sbjct: 123 S--VICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVP----AP-KI 175

Query: 190 PASESLASWNLHPTKPDW-SKGFD--LWTPGEAGAHARLDAFLKGPIKGYGDQRDIPGVE 246
             S +L++  L P   ++  + FD  L+   E    A+L  F       Y  +RD P V+
Sbjct: 176 RVSGALST-PLTPVSLNYPQQAFDAALFPVEENAVIAQLRQFCAQGADEYALRRDFPAVD 234

Query: 247 ATSKLSPHLHFGEIGPRQVW---LATRSAADQGDIPLAEADKFLSEIGWREFNHSILYNW 303
            TS+LS  L  G + PRQ     LA +  A  G         +L+E+ WREF   ++  +
Sbjct: 235 GTSRLSASLATGGLSPRQCLHRLLAEQPQALDG----GPGSVWLNELIWREFYRHLMTWY 290

Query: 304 P----HMPSANFKPEFDGFPWVKDEGALEAWKRGQTGYPIVDAGMRELWTTGFMHNRVRM 359
           P    H P   +        W ++    +AW++G+TGYPIVDA MR+L  TG+MHNR+RM
Sbjct: 291 PALCKHQPFIRWTKRV---AWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRM 347

Query: 360 IVASFLIKHLMIDWREGEAWFWDTLLDADLANNVGNWQWTAGSGADAAPYFRIFNPIAQG 419
           I ASFL+K L+IDWR GE +F   L+D DLA N G WQW A +G DAAPYFRIFNP  QG
Sbjct: 348 ITASFLVKDLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQG 407

Query: 420 EKFDPKGDYVRRWVPELRNVSDDVIHKPWTKPLHLPAGAKRLYSRPIVDHAMARARALEA 479
           E+FD  G+++R+W+P LR++    IH+PW       AG    Y RPIV+H  AR   L A
Sbjct: 408 ERFDRDGEFIRQWLPALRDIPGKAIHEPWR--WAEKAGVVLDYPRPIVEHKQARIATLSA 465

Query: 480 Y 480
           Y
Sbjct: 466 Y 466