Pairwise Alignments

Query, 483 a.a., deoxyribodipyrimidine photolyase from Caulobacter crescentus NA1000

Subject, 473 a.a., deoxyribodipyrimidine photolyase, FAD-binding from Escherichia coli BL21

 Score =  290 bits (742), Expect = 7e-83
 Identities = 184/475 (38%), Positives = 254/475 (53%), Gaps = 26/475 (5%)

Query: 18  IVWFRKDLRIADNPALRHAAQ-SGRPVIPLYILDETP---GIRPMGGASLWWLDKSLKSL 73
           +VWFR+DLR+ DN AL  A + S   V+ LYI   TP       M       ++  L  L
Sbjct: 5   LVWFRQDLRLHDNLALAAACRNSSARVLALYIA--TPRQWATHNMSPRQAELINAQLNGL 62

Query: 74  AASLETLGTKLVLRKG----VAAEVLDQLIAQSGARSVVWNRLYDKPSTDRDAAIKAALR 129
             +L   G  L+ R+      + E++ Q+ A++    + +N  Y+     RD  ++ ALR
Sbjct: 63  QIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALR 122

Query: 130 DRGVDCQSFNAGLLNEPWTVKNGSDQPYKVFTPYWRAAREHLTDVAVTAAPGHLVAPARF 189
           +  V C+ F+  ++  P  V  G+ + YKVFTP+  A  + L +      P  + AP   
Sbjct: 123 N--VVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLRE----GMPECVAAPKVR 176

Query: 190 PASESLASWNLHPTKPDWSKGFDLWTPGEAGAHARLDAFLKGPIKGYGDQRDIPGVEATS 249
            +     + ++    P  S     +   E  A A+L  F +     Y  QRD P VE TS
Sbjct: 177 SSGSIEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTS 236

Query: 250 KLSPHLHFGEIGPRQVW---LATRSAADQGDIPLAEADKFLSEIGWREFNHSILYNWPHM 306
           +LS  L  G + PRQ     LA +  A  G         +LSE+ WREF   ++  +P +
Sbjct: 237 RLSASLATGGLSPRQCLHRLLAEQPQALDG----GAGSVWLSELIWREFYRHLMTYYPSL 292

Query: 307 -PSANFKPEFDGFPWVKDEGALEAWKRGQTGYPIVDAGMRELWTTGFMHNRVRMIVASFL 365
                F    D   W  +   L+AW+ G+TGYPIVDA MR+L +TG+MHNR+RMI ASFL
Sbjct: 293 CKHCPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFL 352

Query: 366 IKHLMIDWREGEAWFWDTLLDADLANNVGNWQWTAGSGADAAPYFRIFNPIAQGEKFDPK 425
           +K L+IDWREGE +F   L+D DLA N G WQW A +G DAAPYFRIFNP  QGEKFD +
Sbjct: 353 VKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRE 412

Query: 426 GDYVRRWVPELRNVSDDVIHKPWTKPLHLPAGAKRLYSRPIVDHAMARARALEAY 480
           G+++RRW+PELR+V    +H+PW       AG    Y +PIVDH  AR R L AY
Sbjct: 413 GEFIRRWLPELRDVPGKAVHEPW--KWAQKAGVMLDYPQPIVDHKEARLRTLAAY 465