Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 303 a.a., cytochrome-c oxidase, cbb3-type subunit III from Rhodanobacter sp. FW510-T8

 Score =  158 bits (400), Expect = 1e-43
 Identities = 105/273 (38%), Positives = 142/273 (52%), Gaps = 24/273 (8%)

Query: 14  TTGHEWDG--IRELDNPLPRWWLWIWYATIAFSIGYWVLMPAWPGLNGYTKGLLNKSDRA 71
           T+GH W    +RE   PLP WW  + ++   F  G+ V +  +PG   + KG+L  +   
Sbjct: 39  TSGHVWAHGVLREGVRPLPMWW--VLFSGAMFVAGF-VYLALFPGFGNF-KGVLGWTSHD 94

Query: 72  EVGQELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVFGDNCATCHGIGGTG 131
           E+ + + A  A         +   +EQ+  DPK    A Q+G+ +F DNCA CH     G
Sbjct: 95  ELARHVAANRAELAPLMDRFKLYPVEQLAADPK----ALQMGKVLFEDNCAACHQRSAKG 150

Query: 132 SK--GYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGRDEMLKPEQIDDL 189
           +   G  +L D+ WL+GG   DI  +I  G RSG        MP +     L  + + +L
Sbjct: 151 NMALGAPDLTDNDWLYGGSGSDITTSIHDG-RSGV-------MPPWAS---LGADNVKNL 199

Query: 190 TEYVVNLSRRPANAAAVARATPLFEAQCSACHGPQGQGNQQLGAPNLTDADWLFGADRAS 249
            +YV++LS  P +AA  A   PLF A C+ACHG  G+GNQ LGAPNLTD  WL G   A 
Sbjct: 200 AQYVLSLSGSPHDAAKAAAGQPLF-ATCAACHGADGKGNQALGAPNLTDHIWLHGGSVAD 258

Query: 250 IRGQIYAGNGGVMPAWSGRLSPETIKALTVYIH 282
           I   I  G  G MPAWS RLS E I  L  Y++
Sbjct: 259 IEKTIGEGRQGHMPAWSPRLSDEQIHVLAAYVY 291