Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 1e-44
 Identities = 103/291 (35%), Positives = 148/291 (50%), Gaps = 34/291 (11%)

Query: 13  ETTGHEWDGIRELDNPLPRWWLWIWYATIAFSIGYWVLMPA---WPG-LNGYTKGLLNKS 68
           ET GH +DGI E DNPLP+WW W++  TI F++GY VL P    W G L GY+    +K 
Sbjct: 38  ETVGHAFDGIEEYDNPLPQWWFWLFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQ 97

Query: 69  DRAEVGQ-----------ELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVF 117
                GQ           E+   +A  G   A      +E++ KDP+    A ++G  +F
Sbjct: 98  TEFSNGQPGWTGVHEWEKEMAKADARFGPIFAKFAAMPIEEVAKDPQ----ALKMGARLF 153

Query: 118 GDNCATCHGIGGTGSKGYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGR 177
             NC+ CHG    G+ G+ NL D+ W WGG+ E I+ TI  G        R   MPA+  
Sbjct: 154 ASNCSVCHGSDAKGAFGFPNLTDNDWRWGGEPETIKTTIMAG--------RHGVMPAWA- 204

Query: 178 DEMLKPEQIDDLTEYVVN-LSRR--PANAAA-VARATPLFEAQCSACHGPQGQGNQQLGA 233
            E++  + + D+  +VV+ L  R  P  A A V     +F A C ACHGP+G+G   +GA
Sbjct: 205 -EVIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGA 263

Query: 234 PNLTDAD-WLFGADRASIRGQIYAGNGGVMPAWSGRLSPETIKALTVYIHS 283
           PNLT    +++G+  A ++  I  G  G MPA       + +  L  Y++S
Sbjct: 264 PNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYS 314



 Score = 63.2 bits (152), Expect = 8e-15
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 205 AVARATPLFEAQCSACHGPQGQGNQQLGAPNLTDADWLFGADRASIRGQIYAGNGGVMPA 264
           A+     LF + CS CHG   +G    G PNLTD DW +G +  +I+  I AG  GVMPA
Sbjct: 145 ALKMGARLFASNCSVCHGSDAKG--AFGFPNLTDNDWRWGGEPETIKTTIMAGRHGVMPA 202

Query: 265 WSGRLSPETIKALTVYIHSNAGGQ 288
           W+  +  + +  +  ++ S   G+
Sbjct: 203 WAEVIGDQGVADVAAFVVSKLDGR 226