Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 315 a.a., cytochrome-c oxidase, cbb3-type subunit III from Pseudomonas fluorescens SBW25

 Score =  166 bits (420), Expect = 6e-46
 Identities = 103/287 (35%), Positives = 151/287 (52%), Gaps = 29/287 (10%)

Query: 13  ETTGHEWDGIRELDNPLPRWWLWIWYATIAFSIGYWVLMPA---WPG-LNGYTKGLLNKS 68
           +T GH +DGI E DNPLP+WW  ++  T+ F++GY +L P    W G L GY  G    +
Sbjct: 38  QTMGHAFDGIEEYDNPLPQWWFMLFAGTLVFAVGYLILYPGLGNWKGVLPGYEDGW---T 94

Query: 69  DRAEVGQELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVFGDNCATCHGIG 128
              E  +E+   +A  G   A      +E++ KDP+    A ++G  +F  NCA CHG  
Sbjct: 95  QTKEWDKEMAKADAKFGPIFAKFSAMPVEEVAKDPQ----ALKMGGRLFASNCAVCHGSD 150

Query: 129 GTGSKGYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGRDEMLKPEQIDD 188
             G+ G+ NL D++W WGG  E I+ TI +G        R + MPA+G  +ML  E + +
Sbjct: 151 AKGAFGFPNLADNIWRWGGSAEAIKTTILNG--------RHAAMPAWG--DMLGDEGVKN 200

Query: 189 LTEYV---VNLSRRPANAAA-VARATPLFEAQCSACHGPQGQGNQQLGAPNLT-DADWLF 243
           +  YV   V     PA+++A +A     F   C ACHGPQG G + +GAP+LT  A +++
Sbjct: 201 VAAYVRHDVAKLPLPADSSADLAAGQTAFNTTCVACHGPQGHGMEAMGAPDLTKPAGYIY 260

Query: 244 GADRASIRGQIYAGNGGVMPAWSGRLSPETIKALTVYIHS---NAGG 287
           G   A ++  I  G  G MPA       + +  L  Y++S   NA G
Sbjct: 261 GTSLAQLQQTIRHGRQGQMPAQEVLQGNDKVHLLAAYVYSLSHNADG 307