Pairwise Alignments

Query, 288 a.a., cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP from Caulobacter crescentus NA1000

Subject, 308 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  164 bits (416), Expect = 2e-45
 Identities = 96/274 (35%), Positives = 145/274 (52%), Gaps = 19/274 (6%)

Query: 9   ATGVETTGHEWDG-IRELDNPLPRWWLWIWYATIAFSIGYWVLMPAWPGLNGYTKGLLNK 67
           AT   TTGH WDG +RE++NPLP+WW++++  T  FSI Y +L P +    G  +GLL  
Sbjct: 38  ATADNTTGHVWDGDLREMNNPLPKWWVYLFIITCVFSIAYGLLYPTF----GKYQGLLGW 93

Query: 68  SDRAEVGQELKALEAHRGEGAAMLRTASLEQIEKDPKLQAYAQQVGQSVFGDNCATCHGI 127
           S   +   E+  +E       A     + +Q+  D    A A  +G+ +F +NCA CHG 
Sbjct: 94  SSDGQHKAEVAKVEKAIAPIYAQFNGMTPQQLAGD----ASAMAIGERLFMNNCAQCHGS 149

Query: 128 GGTGSKGYANLRDDVWLWGGKLEDIQYTITHGIRSGAEGARVSQMPAYGRDEMLKPEQID 187
              G++ + NL D  WLWGG+ + I+ TIT+G      G       A G      P+ + 
Sbjct: 150 DARGARSFPNLTDRDWLWGGEPDAIKATITNG----RNGVMPPMAAAVG-----SPDDVR 200

Query: 188 DLTEYVVNLSRRPANAAAVARATPLFEAQCSACHGPQGQGNQQLGAPNLTDADWLFGADR 247
           ++  +V++LS  P ++   A     F A C+ACHG  G+GN  +GAPNL+D  WL G   
Sbjct: 201 NVAHFVLSLSGSPHDSVRAALGRAGFAA-CAACHGADGKGNTAMGAPNLSDNTWLHGWGE 259

Query: 248 ASIRGQIYAGNGGVMPAWSGRLSPETIKALTVYI 281
            ++   I  G    MPA +G+L+ + I  L+ Y+
Sbjct: 260 EAVVRAITKGFTNQMPAQAGKLNADQIHVLSAYV 293