Pairwise Alignments

Query, 548 a.a., cytochrome cbb3 oxidase subunit I ccoN from Caulobacter crescentus NA1000

Subject, 474 a.a., Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) from Pseudomonas fluorescens GW456-L13

 Score =  610 bits (1573), Expect = e-179
 Identities = 291/472 (61%), Positives = 361/472 (76%), Gaps = 6/472 (1%)

Query: 75  YSDNVVKAGVIATMFWGAAGLLVGVIIAAQLSWPTIFYFPDLGFLNFGRLRPLHTSAVIF 134
           Y+  VV+   I T+ WG  G+ +GV +AAQL WP + +  +L + +FGRLRPLHT+AVIF
Sbjct: 9   YNYKVVRQFAIMTVVWGIVGMGLGVFLAAQLVWPELNF--NLPWTSFGRLRPLHTNAVIF 66

Query: 135 AFGGNALIATSFYVVQRTCKARLAGGITPWFVFWGYQLFIVLAATGYLMGATSGKEYSEP 194
           AFGG AL A+SFY VQRTC+ RL       F FWG+QL I+LAA    +G TS KEY+E 
Sbjct: 67  AFGGCALFASSFYSVQRTCQTRLFAPKIAAFCFWGWQLVILLAAISLPLGYTSSKEYAEL 126

Query: 195 EWYTDLWLTIVWVAYLLVFLGTIWKRKEPHIYVANWFYLAFIVTVALLHVVNNAAVPVGL 254
           EW  D+ +TIVWVAY +VF GTI +RK  HIYV NWF+ AFIVTVA+LH+VNN  +PV  
Sbjct: 127 EWPIDILITIVWVAYAIVFFGTIMQRKTKHIYVGNWFFGAFIVTVAILHIVNNMELPVSF 186

Query: 255 LNHKSYGVFAGVQDALVQWWYGHNAVGFFLTAGFLAMMYYFVPRRVERPVYSYRLSIVHF 314
              KSY +++G  DA+VQWWYGHNAVGFFLTAGFL MMYYFVP++ ERPVYSYRLSIVHF
Sbjct: 187 T--KSYSLYSGATDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHF 244

Query: 315 WALIFIYIWAGPHHLHYTALPQWAQTLGMTFSIMLWMPSWGGMINGLMTLSGAWDKLRTD 374
           WALI +YIWAGPHHLHYTALP WAQ+LGM  S++L  PSWGGMING+MTLSGAW KLR+D
Sbjct: 245 WALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSD 304

Query: 375 PVVRMMVVSIAFYGMSTFEGPVMSIRAVNALSHYTDWTIGHVHSGALGWVGFISFGAIYC 434
           PV+R +VVS+AFYGMSTFEGP+M+I+ VNALSHYTDWTIGHVH+GALGWV  IS GA+Y 
Sbjct: 305 PVLRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYH 364

Query: 435 LVPWLWKKPGMYSNKLIEWHFWIATTGILLYIAAMWVSGVMEGLMWREYTPQGFLAYSFI 494
           ++P ++ +  M+S  LI  HFW+AT G +LYIA+MWV+G+ +GLMWR     G L YSF+
Sbjct: 365 MIPKVFGREQMHSIGLINAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNEDGTLTYSFV 424

Query: 495 ETVSAKHIENVIRTVGGLMYLSGALIMIVNMWKTIASPSAAPADASAAPATA 546
           ET+ A H   V+R VGG ++LSG  +M  N W+T+   ++ PA+ +AA   A
Sbjct: 425 ETLVASHPGFVVRLVGGAIFLSGMFLMAYNTWRTVR--ASQPAEVAAAAQMA 474