Pairwise Alignments

Query, 548 a.a., cytochrome cbb3 oxidase subunit I ccoN from Caulobacter crescentus NA1000

Subject, 475 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

 Score =  581 bits (1497), Expect = e-170
 Identities = 274/470 (58%), Positives = 348/470 (74%), Gaps = 6/470 (1%)

Query: 75  YSDNVVKAGVIATMFWGAAGLLVGVIIAAQLSWPTIFYFPDLGFLNFGRLRPLHTSAVIF 134
           Y+  VV+  VIAT+ WG  G+ +GV IA+QL WP +    DL +  FGRLRPLHTS VIF
Sbjct: 10  YNYKVVRQFVIATIVWGVVGMAMGVWIASQLVWPEMNL--DLPWTTFGRLRPLHTSLVIF 67

Query: 135 AFGGNALIATSFYVVQRTCKARLAGGITPWFVFWGYQLFIVLAATGYLMGATSGKEYSEP 194
            F G+A  A S+Y VQRTC+ RL       F FWG+Q  IV+      +G T+ KEY+E 
Sbjct: 68  GFAGSAQFAASYYAVQRTCQVRLFSDRLAAFTFWGWQSVIVIMLISLPLGYTTTKEYAEI 127

Query: 195 EWYTDLWLTIVWVAYLLVFLGTIWKRKEPHIYVANWFYLAFIVTVALLHVVNNAAVPVGL 254
           E+   +W+ +VWVAY +VF  T+ +RK  HIYV NWF+ AFI+ +A+LHVVN+ A+PV  
Sbjct: 128 EFSGAVWMAVVWVAYAIVFFTTVVRRKTRHIYVGNWFFGAFILVIAMLHVVNHLAIPVDW 187

Query: 255 LNHKSYGVFAGVQDALVQWWYGHNAVGFFLTAGFLAMMYYFVPRRVERPVYSYRLSIVHF 314
              KSY V++G  DA+VQWWYGHNAVGFFLT GFL MMYYFVP++V RPVYSYRLSIVHF
Sbjct: 188 F--KSYPVYSGATDAMVQWWYGHNAVGFFLTTGFLGMMYYFVPKQVGRPVYSYRLSIVHF 245

Query: 315 WALIFIYIWAGPHHLHYTALPQWAQTLGMTFSIMLWMPSWGGMINGLMTLSGAWDKLRTD 374
           WALI +YIWAGPHHLHYTALP WAQ+LGM  S++L  PSWGGMING+MTLSGAW KLRTD
Sbjct: 246 WALITLYIWAGPHHLHYTALPDWAQSLGMAMSLILLAPSWGGMINGMMTLSGAWHKLRTD 305

Query: 375 PVVRMMVVSIAFYGMSTFEGPVMSIRAVNALSHYTDWTIGHVHSGALGWVGFISFGAIYC 434
           P++R +V+S+AFYGMSTFEGP+M+I+ VNALSHYTDWTIGHVH+GALGWV  I+FG++Y 
Sbjct: 306 PILRFLVLSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMITFGSLYH 365

Query: 435 LVPWLWKKPGMYSNKLIEWHFWIATTGILLYIAAMWVSGVMEGLMWREYTPQGFLAYSFI 494
           ++P ++ +  M+S  LI  HFW+AT G +LYIA+MWV+G+ +GLMWR     G L YSF+
Sbjct: 366 MIPKVFGREQMHSVSLINLHFWLATIGTVLYIASMWVNGITQGLMWRAVNDDGTLTYSFV 425

Query: 495 ETVSAKHIENVIRTVGGLMYLSGALIMIVNMWKT--IASPSAAPADASAA 542
           E + A H   V+R  GG+ +L+G ++M  N W+T  +A  + A  DA  A
Sbjct: 426 EALQASHPGFVVRFAGGVFFLTGMVLMAYNTWRTVRVADVNMAQLDARIA 475