Pairwise Alignments

Query, 341 a.a., NIFR3-like protein from Caulobacter crescentus NA1000

Subject, 332 a.a., tRNA dihydrouridine synthase A (EC 1.-.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  367 bits (941), Expect = e-106
 Identities = 179/319 (56%), Positives = 231/319 (72%), Gaps = 3/319 (0%)

Query: 9   AHRFSVAPMMDWTDRHCRSLHRGLSSRALLYTEMVTSGAVVHGDRNKLLGYDPGQHPVAV 68
           A+RFS+APM+DWTDRHCR   R LS +  LYTEMVT+GA++HG +   L Y   +HPVA+
Sbjct: 12  AYRFSIAPMLDWTDRHCRYFLRLLSRQTQLYTEMVTTGAIIHG-KGDYLAYSEEEHPVAL 70

Query: 69  QLGGSDPAELAQAARIAEDYGYDEVNLNVGCPSDRVQSGRFGACLMREPDLVAECMAAIK 128
           QLGGSDPA+LA  A++AE  GYDE+NLNVGCPSDRVQ+G FGACLM    LVA+C+ A++
Sbjct: 71  QLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMR 130

Query: 129 NAVRVPATVKCRIGVDDQDPEESLFTLVDRCAAAG-IDTFVVHARKAWLQGLSPKENRDI 187
           + V +P TVK RIG+DDQD    L   +D  +  G  + F++HARKAWL GLSPKENR+I
Sbjct: 131 DVVSIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWLSGLSPKENREI 190

Query: 188 PPLDYALVYRLKRERPALTIAINGGVPSVDAALEHLANGVDGVMLGRAAYHEAGLLGEVD 247
           PPLDY  VY+LKR+ P LT++INGG+ S++ A EHL + +DGVM+GR AY   G+L  VD
Sbjct: 191 PPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKEHLRH-MDGVMVGREAYQNPGILAAVD 249

Query: 248 RRVFGLDVADVDSFEAVERYRPYLARELAAGTHLAAMSRHMLGLFHGLPGARAWRRILTV 307
           R +FG D  D D    V    PY+ REL+ G +L  ++RHMLGLF G+PGAR WRR L+ 
Sbjct: 250 REIFGADTTDADPVAVVRAMYPYIERELSQGAYLGHITRHMLGLFQGIPGARQWRRYLSE 309

Query: 308 EGVKSGAGLDVVDRALDAV 326
              K+GA + V+++AL  V
Sbjct: 310 NAHKAGADVAVLEQALKLV 328