Pairwise Alignments

Query, 341 a.a., NIFR3-like protein from Caulobacter crescentus NA1000

Subject, 345 a.a., tRNA-dihydrouridine synthase A from Escherichia coli BL21

 Score =  364 bits (935), Expect = e-105
 Identities = 180/317 (56%), Positives = 229/317 (72%), Gaps = 3/317 (0%)

Query: 11  RFSVAPMMDWTDRHCRSLHRGLSSRALLYTEMVTSGAVVHGDRNKLLGYDPGQHPVAVQL 70
           RFSVAPM+DWTDRHCR   R LS   LLYTEMVT+GA++HG +   L Y   +HPVA+QL
Sbjct: 27  RFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHG-KGDYLAYSEEEHPVALQL 85

Query: 71  GGSDPAELAQAARIAEDYGYDEVNLNVGCPSDRVQSGRFGACLMREPDLVAECMAAIKNA 130
           GGSDPA LAQ A++AE  GYDE+NLNVGCPSDRVQ+G FGACLM    LVA+C+ A+++ 
Sbjct: 86  GGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDV 145

Query: 131 VRVPATVKCRIGVDDQDPEESLFTLVDRCAAAG-IDTFVVHARKAWLQGLSPKENRDIPP 189
           V +P TVK RIG+DDQD  E L   ++  +  G  + F++HARKAWL GLSPKENR+IPP
Sbjct: 146 VSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPP 205

Query: 190 LDYALVYRLKRERPALTIAINGGVPSVDAALEHLANGVDGVMLGRAAYHEAGLLGEVDRR 249
           LDY  VY+LKR+ P LT++INGG+ S++ A  HL + +DGVM+GR AY   G+L  VDR 
Sbjct: 206 LDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH-MDGVMVGREAYQNPGILAAVDRE 264

Query: 250 VFGLDVADVDSFEAVERYRPYLARELAAGTHLAAMSRHMLGLFHGLPGARAWRRILTVEG 309
           +FG    D D    V    PY+ REL+ GT+L  ++RHMLGLF G+PGAR WRR L+   
Sbjct: 265 IFGSSDIDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENA 324

Query: 310 VKSGAGLDVVDRALDAV 326
            K+GA ++V++ AL  V
Sbjct: 325 HKAGADINVLEHALKLV 341