Pairwise Alignments

Query, 762 a.a., NAD-dependent formate dehydrogenase alpha subunit from Caulobacter crescentus NA1000

Subject, 759 a.a., putative oxidoreductase, major subunit, acid resistance protein (Katherine Huang) from Escherichia coli BW25113

 Score =  787 bits (2032), Expect = 0.0
 Identities = 393/753 (52%), Positives = 504/753 (66%), Gaps = 9/753 (1%)

Query: 9   VRDYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPDPKHTSSFE 68
           +  Y   AGGWGA+K+VA A+  Q  + +    +   N+PEGFDCPGCAWPDPKH++SF+
Sbjct: 5   IESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHSASFD 64

Query: 69  FCENGAKAVAWEATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYDPADDRYKA 128
            CENGAKA+AWE T K+     FA +TV  LLTW DH++E  GRLT+P+ YD   D YK 
Sbjct: 65  ICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKP 124

Query: 129 IPWDEAFSRAGAALKALSDPNQAEFYASGRASNEAAFLYQLLGRRFGTNNFPDCSNMCHE 188
           + W +AF   GA L++ SDPNQ EFY SGR SNEAAFLYQL  R +G+NNFPDCSNMCHE
Sbjct: 125 LSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSNMCHE 184

Query: 189 PTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRRGATILAFN 248
           PTSVGL  SIG+GKG+V LEDF+  DL++C GHNPGTNHPRM+ +LR   +RGA ++A N
Sbjct: 185 PTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKMIAIN 244

Query: 249 PLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALL-----AMEA 303
           PL+ER LERF +PQ+  EM T   T +ASAYY V IGGD  L++GMM+ L+     A  A
Sbjct: 245 PLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAA 304

Query: 304 QGGGVLDHAFIAEHTAGFEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAAILC 363
               +LD  FI  HT GF+ L   +   +W  IE  SGLS+ +I E A  YA ++  I+C
Sbjct: 305 GRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAERTIIC 364

Query: 364 YGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICPLRGHSNVQGARTVGVWEKPPAAL 423
           YGMG+TQH   +  VQQLVNLLL+KGNIG+PGAGICPLRGHSNVQG RTVG+ EKP A  
Sbjct: 365 YGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKPSAEF 424

Query: 424 LDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMRQLD 483
           L  L + +GF PP   GH  + ++ A+  G+A+  + +GGNFA+A PD   +   + QLD
Sbjct: 425 LARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPLTQLD 484

Query: 484 MAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLNPPA 543
           +AVH+ATK NR+HLL  + + +LP LGR+E+DM+    Q+VTVEDSMSM+HASRG+  PA
Sbjct: 485 LAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKNGAQAVTVEDSMSMIHASRGVLKPA 544

Query: 544 SEHLLSEPAIVAGLAETVFGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVRVPG 603
              L SE A+VAG+A+    +  ++ W  L  DYD +R  I  V P  FADYN R+R PG
Sbjct: 545 GVMLKSECAVVAGIAQAALPQS-VVAWEYLVEDYDRIRNDIEAVLPE-FADYNQRIRHPG 602

Query: 604 GFRLPVGPSDRVWRTASGKANFLVFDPKGGDPRRGDPDVLLLTTLRSHDQYNTTVYGQDD 663
           GF L    ++R W T SGKANF+       DP       L++ T+RSHDQYNTT+YG DD
Sbjct: 603 GFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDD 662

Query: 664 RYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDG--GARIARGFTLVARDIPPGC 721
           RYRGVFG+RDVVF +        ++ G +V+L+A   DG   +R      +V   +    
Sbjct: 663 RYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRS 722

Query: 722 LAAYYPETNVVIALDDHDLRSGTPAYKSAPVRL 754
           L  Y+PE+N ++ LD+HD  SG P YKS PV L
Sbjct: 723 LVTYFPESNHMLTLDNHDPLSGIPGYKSIPVEL 755