Pairwise Alignments

Query, 286 a.a., nucleoside-diphosphate-sugar epimerase from Caulobacter crescentus NA1000

Subject, 274 a.a., predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) from Escherichia coli BW25113

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 29/282 (10%)

Query: 2   RLFVFGLGYVGAAFADALQDRGWDIAASARDPGQAQALRDKGI-------TPADPADRDA 54
           ++ + GLG++G   A +L  RGW +  S       +A R  GI        P    D D 
Sbjct: 3   KVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDD 62

Query: 55  MIAALAGVNAILITAP---PGPDGCPALESIVPALAQAQAYP-DWIGYLSTTGVYGDFEG 110
            + AL   +A++IT P    GP     L+++   +  A A+    I + S+T VYGD +G
Sbjct: 63  -LDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQG 121

Query: 111 RWVFETSPLKAQSVEGARRVGAERDWRQVGRGMGLTVTTFRLPGIYGPGRSALDRLRAGE 170
             V ET+P    +  G R +    DW  +    G +V   RL G+ GPGR    R  AG+
Sbjct: 122 T-VKETTPRNPVTNSG-RVLEELEDW--LHNLPGTSVDILRLAGLVGPGRHP-GRFFAGK 176

Query: 171 GRRIVKPGQVFSRIHVDDIVSGLLASLDHPRAGGVYNLVDDEPAPPQDVMEHAARLLGVP 230
                + G   + +H++D++  +   L  P+ G +YN+               ARLLG+ 
Sbjct: 177 TAPDGEHG--VNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLE 234

Query: 231 VPPDLPFNELGTSPATRRFYAENKRVSNARAKAELGWRPKHP 272
            PP    N L +         + K +  +R   ELG+  ++P
Sbjct: 235 -PPQFR-NSLDS--------GKGKIIDGSRICNELGFEYQYP 266