Pairwise Alignments

Query, 550 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000

Subject, 501 a.a., glycine betaine/L-proline transporter ProP from Erwinia amylovora T8

 Score =  222 bits (566), Expect = 2e-62
 Identities = 136/394 (34%), Positives = 210/394 (53%), Gaps = 26/394 (6%)

Query: 18  VGASSLGTVFEWYDFYLYGSLAPIITSHFFSGVNETTGFILALLAFAAGFAIRPLGALIF 77
           + A+SLG   EW+DF +YG +A  +   FF G +  T  I AL  F+  F IRPLG L F
Sbjct: 28  ITAASLGNAMEWFDFGVYGFVAFALGQVFFPGADSGTQMIAALATFSVPFLIRPLGGLFF 87

Query: 78  GRLGDLWGRKNTFLITMLLMGVSTFVVGLLPSYAQIGVAAPIALVLMRLVQGLALGGEYG 137
           G LGD +GR+    IT+++M VSTF +GL+PSYA IG+ API L+L ++ QG ++GGEY 
Sbjct: 88  GALGDKYGRQKILSITIIIMSVSTFCIGLIPSYASIGIWAPILLLLCKMAQGFSVGGEYT 147

Query: 138 GAATYVAEHAPPGKRGFYTSWIQTTATIGLFLSLAVILVARIQLGEEAFKAWGWRIPFLV 197
           GA+ +VAE++P  KRGF  SW+   +  G  L   ++++    +GE +F  WGWRIPF V
Sbjct: 148 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGLVVLISAVIGEASFLDWGWRIPFFV 207

Query: 198 SLLLLGVSLWIRLKLHESPTFERMIAE-GKGSKKPLTE---------AFGNWPNLKIVLL 247
           +L L  + L++R  L E+P F++ + +  KG ++ L +         A  +W +    LL
Sbjct: 208 ALPLGIIGLYLRHALEETPAFQQHVDKLEKGDREGLADGPRVSFKEIATRHWKS----LL 263

Query: 248 ALVGLTMGQAVVWYTGQFYALFFLEKTLKLDGALANTLVAVALLIGTPFF-VICGWLSDK 306
           A +GL +   V +Y    Y   +L   L         ++ +A+++G  F   + G +SDK
Sbjct: 264 ACIGLVIATNVTYYMLLTYMPSYLSHNLHYSED-HGVMIIIAIMLGMLFVQPVMGLMSDK 322

Query: 307 IGRKPIIILGCLLAALTYFPIFKAITTYANPALAKAEATAPVVVTADTATCAFQFDLIGK 366
            GR+P +I+G +       P F  I +     +     T  V++ + T   A     +  
Sbjct: 323 FGRRPFVIIGSIALLTLSVPCFMLINSGVMGLIFAGLLTLAVILNSFTGVMASSLPAM-- 380

Query: 367 AKFNTPCDVAKAYLAKAGVSYSVQAAPAG-TPTA 399
                P  +  + LA A   +++    AG TPTA
Sbjct: 381 ----FPTHIRYSALASA---FNISVLVAGLTPTA 407



 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 3/88 (3%)

Query: 456 GLLALLVIYVTMVYGPIAAMLVELFPTRIRYTAMSLPYHIGNGWFGGFLPTTAFAIVAAT 515
           GLL L VI  +   G +A+ L  +FPT IRY+A++  ++I +    G  PT A  +V  T
Sbjct: 358 GLLTLAVILNSFT-GVMASSLPAMFPTHIRYSALASAFNI-SVLVAGLTPTAAAWLVETT 415

Query: 516 GDIYSGLWYPVIIAAITAVVGGLFLKDT 543
            ++Y   +Y +++A I  ++ G+ +K+T
Sbjct: 416 SNLYMPAYYLMVVAVI-GLITGIMMKET 442