Pairwise Alignments

Query, 1027 a.a., alpha-L-rhamnosidase from Caulobacter crescentus NA1000

Subject, 884 a.a., Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  359 bits (921), Expect = e-103
 Identities = 233/743 (31%), Positives = 365/743 (49%), Gaps = 38/743 (5%)

Query: 305  PARLLRRTFTLSKPPTQARLYVSALGGYRIWLNGRRVGDDELQTEPAAYRRHVPYRAYDV 364
            PA   R+ F +S P  +A  Y++  G Y + +NG+R+G+  L      + R V Y  +DV
Sbjct: 145  PAPYFRKEFAISNPIKKATAYIAVGGLYELRINGKRIGNHRLDPAYTRFDRRVLYVTHDV 204

Query: 365  TDLLRDGENVVGLIVGDGTFASYQAPDGRYAYGPGPRRVRLFLESRDSGD--RVERVATD 422
            T+ L++G+N +G+++G+G +         + + P   R    L+ R + +   VE + T+
Sbjct: 205  TEALQNGQNALGVLLGNGWYNHQSTAVWNFHHAPWRNRPTFCLDLRITYEDGSVETIRTE 264

Query: 423  GEWRHALSPVLMSEIYAGEDHDLRLWPRGWAEPGFDDSGWSRVWTAPPPEGAPCALLSEP 482
              W+ AL PV+ + IY  E +D R    GW +PGF+   W  V     P     A    P
Sbjct: 265  KGWKTALGPVIFNSIYTAEHYDARKEQPGWDKPGFEAGDWKEVIYRSAPAKEITAQAMPP 324

Query: 483  IRETRVLKAASIRAVGPGRHIVDFGQNFAGRVRLRVKGAKGAPVIVRHAEILDGQGALDR 542
            IR    + AA++  +     + D G+N AG   +++KG  G  + ++H E L   G +D 
Sbjct: 325  IRYNETIPAATMDKINDSTFVFDVGRNIAGISEIKIKGEAGTVLRLKHGERLHEDGRVDM 384

Query: 543  RNLRV---------ARAEDRYILNGDDAPETLQPSFTYQGFRYAEI--EGVAGLDRDMID 591
             N+ V             D YIL+G    ET  P F Y+GF+Y E+  +    L ++ + 
Sbjct: 385  SNIDVHYRPTDDGDPFQTDIYILSG-RGEETFSPKFNYKGFQYVEVTADRPISLTKENLT 443

Query: 592  GVVLSSDLPEIGVFRTAEPLVQNLWLNSLWSQRSNFMGIPTDCPQRDERLGWTGDAQVFW 651
               + SD+  +G   +A   +  +W  +  +  SN  G PTDCPQR E+ GWTGDA +  
Sbjct: 444  AYFMHSDVEPVGTVSSANATLDGIWWATNNAYLSNLFGYPTDCPQR-EKNGWTGDAHIAI 502

Query: 652  ETAAFNMDVGGFTRGFARTLRDDQAPNGAYPMWSP-SPRGLGWGTTTPTPGWADGGVMLP 710
            ET  ++ D       +    RD+Q PNG  P   P S  G  WG     P W     ++P
Sbjct: 503  ETGLYSFDAIKVYEKWLDDHRDEQQPNGVLPSIIPTSGWGYEWGN---GPDWTSTICLIP 559

Query: 711  YVAYLHSGDRSIVDENWTAMSAYVSGVLAENPDGLWRRGRGADFGDWLALDGKWPGDETT 770
            +  YL  GD+ I++EN+ +M  YV  + A +PDGL   G     GDW+ +  K P + T+
Sbjct: 560  WNVYLFYGDKRILEENYKSMKRYVDHLTAISPDGLTAWG----LGDWVPVKSKSPVEYTS 615

Query: 771  PKDLIATAMLARSVDQLAQMAAWTGRSAEAKTWRGQADRIKAAFASAFVRADGTV-GNGS 829
                +  A +      LAQ A   G  AEA+ +   A++I+ A    ++  +  V G+G 
Sbjct: 616  SAYYLTDARI------LAQTAKLLGHEAEAEKYTELANKIRTAINEKYLNREKAVYGSGY 669

Query: 830  HTGYILALRLGLAPQPLRKAAGEHLAADIRRRGTLLSTGFLGTPLALDALADHGHAGLAF 889
             T   +AL+  + P+ LR     +LA  +   G  L  G LGT   L+AL+D+G+  +A+
Sbjct: 670  QTEMSVALQWDIVPEELRGKVAANLAKRVEADGFHLDVGLLGTKAILNALSDNGYPDIAY 729

Query: 890  DLLLRTEYPSWGYMVRRGATTTWERWNGDT-GDVSMNSFNHYALGAICGFLYRRVAGV-- 946
             +  +  YPSWG+ +  GATT +E W  D+  D+SM   NH   G +  ++Y+ + G+  
Sbjct: 730  KVAAQETYPSWGWWIVNGATTLYENWKIDSEHDISM---NHIMFGEVGAWIYKALGGMKP 786

Query: 947  EPITPGFGAFRVAPLIDPRLRSAGATVDSVRGRIETDWRVTGDKAV-LKVRVPANSRAEV 1005
            +P  PGF    + P     L    A+ D   G+I + W+     AV   VR+PAN+ A +
Sbjct: 787  DPEHPGFKNILLEPHFVEGLEHFEASHDGPYGKIISSWKRDETGAVQYTVRIPANTTATL 846

Query: 1006 VLPTLTRSL-GAGDHTLSVPLAK 1027
            +LP  TR L G     + V L K
Sbjct: 847  ILPKGTRFLKGESPANVEVSLQK 869



 Score = 78.6 bits (192), Expect = 2e-18
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 8/117 (6%)

Query: 35  LRTAMRRQPLGIDDPQPMLSWRLEGPA-GAVQSAYQIMVASTAEKLHAGVADLWDSGRVK 93
           L+T     PLG+D  +P L+W+++    GA QSAY+I+V         G   +W+SG+V 
Sbjct: 26  LKTEYLIDPLGLDTSRPRLTWQMDDDRQGAKQSAYRILVTKD------GAGSVWNSGKVS 79

Query: 94  SSESVGVRYGGAPLKPRQRCVWRVRAWDAAGRASDWSPPATWEMGLIDQSEWIGDWL 150
           S   + V Y G  L+P     W V  WD  G +   S  A +EMG++D++ W G W+
Sbjct: 80  SDRQL-VAYDGKALEPFAAYFWTVEVWDHEGNSLGISKKAHFEMGMMDEANWQGVWI 135