Pairwise Alignments

Query, 555 a.a., oxidoreductase, GMC family from Caulobacter crescentus NA1000

Subject, 550 a.a., choline dehydrogenase from Pseudomonas putida KT2440

 Score =  424 bits (1091), Expect = e-123
 Identities = 235/543 (43%), Positives = 327/543 (60%), Gaps = 18/543 (3%)

Query: 8   DYVIVGAGSAGCVLAARLSENGRYKVVLLEAGGDDRPTKNLSQFASNMMIHIPVGYSSTL 67
           DYV+VGAG AGC+LA RLS +   +V+LLEAGG D          +   IHIPVGY   +
Sbjct: 11  DYVVVGAGPAGCLLANRLSADPSCRVLLLEAGGRD----------NYPWIHIPVGYLYCI 60

Query: 68  KDPKVNWLFTTEPDPGTGGRSHVWPRGKVLGGSSSINAMLYVRGQAADYDGWRQLGCEGW 127
            +P+ +W F TE  PG GGR+  +PRGKVLGG SSIN M+Y+RGQAADYD W   G +GW
Sbjct: 61  GNPRTDWCFKTEAQPGLGGRALGYPRGKVLGGCSSINGMIYMRGQAADYDHWAAQGNDGW 120

Query: 128 AWDDVLPYFRKAQNQERGACDLHATGGPLNVADMRDAHPISEALIEACDQAGIPRYPDLN 187
           AW DVLP F+ ++N   GA + H   G   V   R + PI +A  +A +Q+GI +  D N
Sbjct: 121 AWKDVLPLFKASENHFAGASEHHGAEGEWRVERQRYSWPILDAFRDAAEQSGIGKVDDFN 180

Query: 188 GADQEGATWYQVTQKNGARCSSAVAYLHPAMKRPNLRVETNALAGRVLFEGKRAVGVEFM 247
             D +G  ++QV Q++G R +++ A+L P   R NL V T     +VL +  RA  V+ +
Sbjct: 181 TGDNQGCGYFQVNQRSGVRWNASKAFLRPIKDRANLTVLTGVQVDQVLLDNTRARAVKAL 240

Query: 248 QNGERRAAMARGEVILAGGAINSPQLLQLSGVGAGGLLREHGIEVVADLPGVGENLQDHY 307
             G      AR E+IL  GA+ SP +LQ SG+G   LL   GI V  D+PGVG NLQDH 
Sbjct: 241 WQGAWHEFAARREIILCAGAVGSPGILQRSGIGPRQLLESLGIGVRHDMPGVGGNLQDHL 300

Query: 308 IVAARYRLK-SGTVSVNEQSKGGRLAAEAMKYLLFRKGLLTLSAAHVAAFCKSRPDLAGP 366
            +   Y+++ + T++    S  G++    ++YL  R G L ++ + + AF +S P+ A  
Sbjct: 301 QLRLIYQIRNTRTLNQMANSLWGKMGM-GLRYLYDRSGPLAMAPSQLGAFVRSSPEQATA 359

Query: 367 DIQFHILPATMDLDKLFNEQKMELEGAPGMTIAPCQLRPESRGYIRIKSADPSVYPAIFA 426
           ++Q+H+ P +++    F E    L   P  T + C LRP SRG I I S D +  P I  
Sbjct: 360 NLQYHVQPLSLE---RFGE---PLHQFPAFTASVCNLRPASRGRIDICSTDMNSTPRIDP 413

Query: 427 NYLADPLDQEVIVAGLKWARKIGQQPAIAQYVESEMNPGLEVQTDEQLLDFARQTGSTLY 486
           NYL+ P D  V    ++  R+I Q PA+A +   E  PG  +Q++E L + A + G+T++
Sbjct: 414 NYLSAPQDLRVAADAIRLTRRIVQAPALAAFEPKEYLPGPALQSEEDLFEAAGKIGTTIF 473

Query: 487 HPVGSCQMGTGPMAVVDAQLRVRGVEGLRVVDASIMPRLISGNTNAPSIMIGEKGADMIL 546
           HPVG+C+MG G M VVD QLRV G+ GLRV DASIMP++ SGNT +P++MI EK A +IL
Sbjct: 474 HPVGTCRMGNGAMDVVDNQLRVHGIPGLRVADASIMPQITSGNTCSPTLMIAEKAAQLIL 533

Query: 547 AAA 549
             A
Sbjct: 534 KGA 536