Pairwise Alignments

Query, 555 a.a., oxidoreductase, GMC family from Caulobacter crescentus NA1000

Subject, 532 a.a., Choline dehydrogenase (EC 1.1.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  465 bits (1197), Expect = e-135
 Identities = 251/543 (46%), Positives = 347/543 (63%), Gaps = 19/543 (3%)

Query: 8   DYVIVGAGSAGCVLAARLSENGRYKVVLLEAGGDDRPTKNLSQFASNMMIHIPVGYSSTL 67
           DY+IVG G+AGCVLA RL+ +GR++V++LEAGG+ +          +M I+IP G+S  L
Sbjct: 5   DYIIVGGGTAGCVLANRLTASGRHRVLMLEAGGEPK----------SMWINIPAGFSKLL 54

Query: 68  KDPKVNWLFTTEPDPGTGGRSHVWPRGKVLGGSSSINAMLYVRGQAADYDGWRQLGCEGW 127
            + + NW F TE +  T GR    PRGK LGGS+ IN M+YVRGQ  DYD WR  G  GW
Sbjct: 55  TNRQYNWRFQTEAEDNTNGRVISVPRGKGLGGSTLINGMIYVRGQPGDYDAWRDTGARGW 114

Query: 128 AWDDVLPYFRKAQN-QERGACDLHATGGPLNVADMRDAHPISEALIEACDQAGIPRYPDL 186
           +++DV PYFRK +  +E G    HA  GP+ +  +R+  PIS+A I+A ++ G+P   D 
Sbjct: 115 SFEDVEPYFRKLERCKEGGPTRGHA--GPMRLEKVRERFPISDAFIQAANEDGLPFNDDY 172

Query: 187 NGADQEGATWYQVTQKNGARCSSAVAYLHPAMKRPNLRVETNALAGRVLFEGKRAVGVEF 246
           N   Q+G  +Y+VTQ  G R S+   YL PA++R NL+V T+A   RV   GKR  GV +
Sbjct: 173 NAERQDGVGYYEVTQSGGRRWSAYKGYLEPALQRKNLKVVTDAQVLRVDLAGKRCTGVTY 232

Query: 247 MQNGERRAAMARGEVILAGGAINSPQLLQLSGVGAGGLLREHGIEVVADLPGVGENLQDH 306
            + G+     A  EVILA GAI SPQ+L+LSG+G   LL+  GI V   L GVGEN  DH
Sbjct: 233 RKGGQDVTVKAGIEVILAAGAIQSPQILELSGIGQPELLKRLGIPVEHALEGVGENYIDH 292

Query: 307 YIVAARYRLKSGTVSVNEQSKGGRLAAEAMKYLLFRKGLLTLSAAHVAAFCKSRPDLAGP 366
           +     +R+K GTV++NE S+  RL     +Y   R G+LTL    V AF ++RP++A P
Sbjct: 293 FATRMNWRVK-GTVTLNEMSRNWRLGLAVSQYFAKRTGILTLGTGLVNAFVRTRPEMATP 351

Query: 367 DIQFHILPATMDLDKLFNEQKMELEGAPGMTIAPCQLRPESRGYIRIKSADPSVYPAIFA 426
           D QF  + A+       N  +  L+  PGMTI   QLRP+S G I IKS D S  P+I  
Sbjct: 352 DAQFFFVHASYK-----NAAERVLDRQPGMTIGVTQLRPQSIGSIHIKSRDVSAGPSIRP 406

Query: 427 NYLADPLDQEVIVAGLKWARKIGQQPAIAQYVESEMNPGLEVQTDEQLLDFARQTGSTLY 486
           N+L+  +DQE +V  ++ AR+I  +PA+ +YV  EM+PG  V++D   L FAR  G T+Y
Sbjct: 407 NFLSSTVDQECMVRSMEIARRIVTRPAMKKYVVEEMSPGENVKSDADWLAFARANGQTIY 466

Query: 487 HPVGSCQMGTGPMAVVDAQLRVRGVEGLRVVDASIMPRLISGNTNAPSIMIGEKGADMIL 546
           HP+G+C+MG   +AVVD +L+VRG++GLRVVDAS+MP+++SGN  A  +M+ E+GAD++L
Sbjct: 467 HPIGTCRMGDDDLAVVDPRLKVRGLQGLRVVDASVMPKMVSGNIQAAVMMVAERGADLVL 526

Query: 547 AAA 549
             A
Sbjct: 527 EDA 529