Pairwise Alignments

Query, 555 a.a., oxidoreductase, GMC family from Caulobacter crescentus NA1000

Subject, 552 a.a., Choline dehydrogenase (EC 1.1.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  408 bits (1049), Expect = e-118
 Identities = 236/561 (42%), Positives = 326/561 (58%), Gaps = 38/561 (6%)

Query: 8   DYVIVGAGSAGCVLAARLSENGRYKVVLLEAGGDDRPTKNLSQFASNMMIHIPVGYSSTL 67
           DY+++G G+AGC++A RLS N + +V+L+EAG  D              IHIPVGY   +
Sbjct: 7   DYIVIGGGTAGCLMANRLSANRQKRVLLIEAGRKD----------DYHWIHIPVGYLYCI 56

Query: 68  KDPKVNWLFTTEPDPGTGGRSHVWPRGKVLGGSSSINAMLYVRGQAADYDGWRQL-GCEG 126
            +P+ +WL+ TE + G  GR+  +PRGK LGG SSIN M+Y+RGQ+ DYD W  L G + 
Sbjct: 57  GNPRTDWLYNTEAEAGLNGRALRYPRGKTLGGCSSINGMIYMRGQSRDYDQWAALTGDDA 116

Query: 127 WAWDDVLPYFRKAQNQ----ERGACD-------LHATGGPLNVADMRDAHPISEALIEAC 175
           W W++ LP F+K +N     E+ A          H  GG   V   R    + +A  EA 
Sbjct: 117 WRWENALPDFKKHENHYLGDEQNAAQRDGNFRAYHGHGGEWRVEKQRLRWDVLDAFAEAA 176

Query: 176 DQAGIPRYPDLNGADQEGATWYQVTQKNGARCSSAVAYLHPAMK-RPNLRVETNALAGRV 234
            QAGIP   D N  D EG  ++QV QK G R ++A A+L P    RPN  +  +A   R+
Sbjct: 177 QQAGIPHTTDFNRGDNEGVGYFQVNQKEGLRWNTARAFLRPTCYGRPNFELWNSAQVTRL 236

Query: 235 LFEGK-----RAVGVEFMQNGERRAAMARGEVILAGGAINSPQLLQLSGVGAGGLLREHG 289
           + +       R  GVE         A A  EV+L  G+I SPQ+LQLSG+G   LLR HG
Sbjct: 237 VTQRGADGELRCTGVEVWDGVAHVTAEATSEVVLCAGSIGSPQILQLSGIGPAELLRRHG 296

Query: 290 IEVVADLPGVGENLQDHYIVAARYRLKSG-TVSVNEQSKGGRLAAEAMKYLLFRKGLLTL 348
           IEVV DLPGVG NLQDH  + + Y +    T++V   S  G+ A   ++YL  R G +++
Sbjct: 297 IEVVVDLPGVGANLQDHLQIRSVYTVNGAPTLNVLSSSWMGK-ARIGLEYLFKRSGPMSM 355

Query: 349 SAAHVAAFCKSRPDLAGPDIQFHILPATMDLDKLFNEQKMELEGAPGMTIAPCQLRPESR 408
           + + + AF +S P L   ++++H+ P ++D    F E    L   P  T + C L P SR
Sbjct: 356 APSQLGAFTRSDPALPYANLEYHVQPLSLDA---FGEP---LHSFPAFTASVCNLNPTSR 409

Query: 409 GYIRIKSADPSVYPAIFANYLADPLDQEVIVAGLKWARKIGQQPAIAQYVESEMNPGLEV 468
           G + I+SA+ +  P I  NYL+ P D++V    L+  RKI  QPA+A+Y   E  PG++ 
Sbjct: 410 GTVHIRSANFADAPLIAPNYLSTPEDRQVAADSLRVTRKIVAQPALAKYQPEEFKPGVQY 469

Query: 469 QTDEQLLDFARQTGSTLYHPVGSCQMGTG--PMAVVDAQLRVRGVEGLRVVDASIMPRLI 526
           QTDE+L   A    +T++HPVG+ +MG    PMAVVD+ LRVRGV GLRVVDA +MP + 
Sbjct: 470 QTDEELARLAGDIATTIFHPVGTTRMGRADDPMAVVDSHLRVRGVAGLRVVDAGVMPTIT 529

Query: 527 SGNTNAPSIMIGEKGADMILA 547
           SGNTN+P++MI EK A  I A
Sbjct: 530 SGNTNSPTLMIAEKAAHWITA 550