Pairwise Alignments

Query, 703 a.a., flagellar hook-associated protein FlaN from Caulobacter crescentus NA1000

Subject, 553 a.a., Flagellar hook-associated protein FlgK from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 86.3 bits (212), Expect = 4e-21
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 25/318 (7%)

Query: 3   LNAIMSTATSGMMAAQTGLRVTSDNIANVNTTGYVRKTV----SQSNLLSNG-MGVGVNI 57
           ++++++ A SG+ AAQ  L   S+NI N N  GY R+T     + S L + G +G GV +
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 58  DAIKRATDQFLQSASLNAASESGRASIVASTLNSAQQLFGDPSGE-----TSFFTVLDDV 112
             ++R  D F+ +    A ++S   +     ++    L  D S        SFFT L  +
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTL 120

Query: 113 YAAFSSAQDDPSSSLLRTQALTRLDDFLSGSSRITASLSKLGKDADTRIAADVGRVNDLL 172
                S  +DP++   R   + + +  ++        L    K  +  I + V ++N+  
Sbjct: 121 V----SNAEDPAA---RQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYA 173

Query: 173 SQIDALNTDITRAKVAGADATGAE--NVQSSLVDELSKLMNVQISPRTLGGIVVRSTEGL 230
            QI  LN  I+R    GA A+  +  + +  LV EL+K++ V++S +  G   +    G 
Sbjct: 174 KQIANLNDQISRMTGVGAGASPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGY 233

Query: 231 NLAGDGAAK----VTYQTSATATGFLTVQLANGS-DYPVPLNISSGEIRGLMDVRNIDLV 285
            L     A+    V      T T    V  A G+ + P  L +++G + GL+  R+ DL 
Sbjct: 234 TLVQGSTARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKL-LNTGSLGGLLTFRSQDLD 292

Query: 286 NLSDQLGEFTSRATEEIN 303
              + LG+      +  N
Sbjct: 293 QTRNTLGQLALAFADAFN 310



 Score = 52.0 bits (123), Expect = 8e-11
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 562 NTAMDQNPKLLPFAKLDLTQAVGGNAALAIGDG--RGALALANAGESTATFGVAGSAASV 619
           N  +D N K+   A++ +      +  +  GD   R   AL +   S     V G   + 
Sbjct: 419 NAIVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALLDLQNSN----VVGGNKTF 474

Query: 620 TMTVARYAADFGGSIARKAATAESRKEAAAAVSSEVDSQRQSEEGVNLDEELINLTTYQQ 679
               A   +D G     K +T ++     A V  ++  Q+QS  GVNLDEE  NL  YQQ
Sbjct: 475 NDAYATLVSDVGN----KTSTLKTSSTTQANVVKQLYKQQQSVSGVNLDEEYGNLQRYQQ 530

Query: 680 AFNASARLIQATKDMFDVLNGI 701
            + A+A+++Q    +FD L  I
Sbjct: 531 YYLANAQVLQTANALFDALLNI 552